Scomber scombrus (Atlantic mackerel): 133997898
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Entry
133997898 CDS
T10651
Symbol
nkx2.2b
Name
(RefSeq) NK2 homeobox 2b
KO
K08029
homeobox protein Nkx-2.2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133997898 (nkx2.2b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
133997898 (nkx2.2b)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF1373
Motif
Other DBs
NCBI-GeneID:
133997898
NCBI-ProteinID:
XP_062293614
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Position
17:4418130..4419818
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AA seq
255 aa
AA seq
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MSFGTNMRTGFLVQDILDMPDSFTGRCGSGTEETEEDDTEEASAEVSGPENAQKLGFTGR
NMRERGEGSFSRWSCGSGNLHFSLHGLSLQSRVEPKSPEFSPDPEMDAAGGSEQKSRGKK
RRVLFSKAQTFELERRFRQQRYLSAPEREHLAGLIQLTPNQVKIWFQNHRYKMKRARTER
SLEALQPLPARRVAIPVLVRDGRPCDRITVQDLEATLRSGLSLPLCAYSPLLHPGLQQQH
HPGVQQLAHMYHWSW
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttggcaccaacatgagaacgggcttcttggtgcaggacatcctggatatgccc
gactccttcaccgggaggtgcggctccgggaccgaggagacagaggaagacgacaccgag
gaggcctccgcggaggtttccgggccagaaaacgcgcagaaactgggatttaccgggagg
aatatgcgcgagagaggcgaggggagcttcagcaggtggagctgcggatccggtaacctg
cacttctcattacacggtctttccttacaatcccgggtcgagcctaaatctccagagttc
tccccggacccggagatggatgctgcgggcggctctgagcagaagagccgtggcaagaag
cgcagagtcctgttctccaaggcccagaccttcgagctggagcgtcgcttccggcagcag
cgctacctgtccgccccggagagagagcacctggccgggctcatccagctcaccccgaac
caggtgaagatctggttccaaaaccaccgatacaagatgaagcgggcccggacggagcgc
agcctggaggcgctgcagccgctgcccgcgcgcagggtcgccatcccggtgctggtgcgg
gacggaaggccatgcgaccggatcacagtgcaggacctggaggcgacgctccggtccggt
ttgagtctcccactctgtgcctactctccgctgctgcaccccggcctgcagcagcagcat
caccccggggtgcagcagctggcgcacatgtaccactggagctggtga
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