Scomber scombrus (Atlantic mackerel): 133997981
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Entry
133997981 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133997981
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GFIT
Other DBs
NCBI-GeneID:
133997981
NCBI-ProteinID:
XP_062293705
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Position
17:complement(198994..206944)
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AA seq
1053 aa
AA seq
DB search
MDEQGGKTVDSIPKEDLLRTLQNLGENDFKTFKWYLEQPEVLEDLPTIPKSRLEKADQLD
TVDLMVQTYSENTLQVTKKVLGKMNKQCSHTISKQILAMCQNKVKSNLKEKFQNLFEKIT
KAGNSKLLQEFFTEIYILMQETGEVNMEHEIRQIETASRKPDRPETTIRQEDIFKASPGR
DKPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVE
LVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNL
IRGKLLPSARLWITTRPAAANQIPPECVGMMTEVRGFTDPQKEEYFRKRFRDEEQASTII
SHIKTSRSLHIMCHIPVFCWITATVLEDVLKRRKRTELPKSLTEMYIHFLVVQAKLKKVK
YDGGAERDPHWSPESRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVCSGVFT
EIFKEERGLYQDKVFCFVHLSLQEFLAALHVHLTFIKSGVSLLAEKTSWWSEVFRGKSTH
FYQRAVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSSSQTNQKTVLYIKKK
ISKNVSAERSINLFHCLNELNDRSLVEQIQQSLRSGSLSTDKLSPAQWSALGFILLSSEK
DLDVFDLKKYSASEEVLLRLLPVVKASNKVLLNHCNLSERSCAALSSVLSSQSSSLRDLD
LSDNNLQDSGVKQLSAGLESPHCTLETLSLSGCQITEEGCASLASALSSNPSHLRELDLS
NNNLQDSGVKQLSAGLESPHCTLETLSLSACLITEEGCASLASALRSNPSHLRELDLSYN
HPGDSGEKLLSAGLEDPHWRLDTLRVDHGGEQWIKKYFCELTLDTNTVNYYLKLSDNNRK
VTHVGKDQSYPDHPDRFDYKPQVLCSNGLTGRCYWEVECRTVDISVSYRGISRKGDSDDC
LFGYNDQSWSLWYNAGGYSVHHNKTRTYVPSSSVSSRVAVYVDCPAGTLSFYRVSSDTLI
HLHTFYTTFTEPLYPGFGFGSYGSSVYVCPLSE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagggaggaaaaacagtggattctatccctaaagaggatctcttgagaact
ttacagaatttgggagaaaatgactttaaaacatttaagtggtacctggagcagcctgag
gttctggaagacctcccaacaatcccaaagagtcgactggagaaggcggaccagttggac
acagtggatctgatggttcagacctacagtgaaaacactctgcaggtgaccaaaaaggtt
ctggggaagatgaataagcaatgctcacacaccatctctaaacagattcttgccatgtgt
cagaataaagtcaaatccaacctgaaggagaaatttcaaaatttgtttgagaaaatcaca
aaagcaggaaattccaaacttctacaagagttcttcaccgagatctacatactaatgcaa
gaaactggagaggtgaacatggaacatgagatcagacagattgaaacagcatccaggaaa
ccagacagaccagaaacaacaatcagacaagaagacatctttaaagcctcacctggaaga
gataaaccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtctta
acacagaagttcactctggactgggctgaagacaaagccaaccaggacatacacttcaca
tttccattcactttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaa
cttgttcatcacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttc
caggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaac
actgagatcctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctc
atcagggggaaactgcttccctctgctcgcctctggataaccacacgacctgcagcagcc
aatcagatccctcctgagtgtgtcggcatgatgacagaggtcagaggcttcactgaccca
cagaaggaggagtacttcaggaagagattcagagatgaggagcaggccagcaccatcatc
tcccacatcaagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctgg
atcactgctacagttctggaggatgtgttgaaaagaagaaagagaacagagctgcccaag
tccctgactgagatgtacatccacttcctggtggttcaggccaaactgaagaaggtcaag
tatgatggaggagctgagagagatccacactggagtccagagagcaggaagatgattgag
tctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatca
gacctgacagagtgtggcatcgatatcagagcagcctcagtgtgctcaggagtgttcaca
gagatctttaaagaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctg
agccttcaggagtttctggctgctcttcatgtccatctgacattcatcaagtctggagtc
agtctgctggcagaaaaaacatcctggtggtctgaagtcttcagaggcaaatcaacacat
ttctaccagagagctgtggacgaggccttaaagagtccaaatggacacctggacttgttc
ctccgcttcctcctgggtctttcactgcagaccaatcagactctcctacgaggtctgctg
acacagacaggaagtagctcacagaccaatcagaaaacagtcctgtacatcaagaagaag
atcagtaagaatgtgtctgcagagagaagcatcaatctgttccactgtctgaatgaactg
aatgatcgttctctagtggagcagatccaacagtccctgagatcaggaagtctctccaca
gataaactgtctcctgctcagtggtcagctcttggcttcatcttactgtcatcagaaaaa
gatctagacgtgtttgacctgaagaaatactctgcttcagaggaggttcttctgaggctg
ctgccagtggtcaaagcttcaaataaagttctactgaatcactgtaacctctcagagaga
agctgtgcagctctgtcctcagttctcagctcccagtcctctagtctgagagatctggac
ctgagtgacaacaacctgcaggattcaggagtgaagcagctttctgctggactggagagt
ccacactgtacactggaaactctcagtctgtcaggatgtcagatcacagaggaaggctgt
gcttctctggcctcagctctgagctccaacccctcccatctgagagagctggacctgagt
aacaacaacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacac
tgtacactggaaactctcagcctgtcagcatgtctgatcacagaggaaggctgtgcttct
ctggcctcagctctgcgctccaacccctcccatctgagagagctggacctgagctacaat
catccaggagactcaggagagaagcttttgtctgctggactggaggatccacactggaga
ctggacactctcagggtggaccatggtggagagcagtggataaaaaagtatttctgtgaa
ctcacactggacacaaacacagtaaactattacctcaaactgtctgacaacaacaggaag
gtgacacatgtgggaaaggatcagtcatatcctgatcatccagacagatttgactacaag
cctcaggtgctgtgtagtaatggtctgactggtcgctgttactgggaggtcgagtgtaga
acagttgatatatcagtgagttacagaggaatcagcaggaaaggagacagtgacgactgt
ttgtttggatataatgatcagtcctggagtctgtggtacaatgctggtggttactctgtc
catcacaataagacaagaacatatgtcccctcctcctctgtctctagcagagtagcagtg
tatgtggactgtcctgctggcactctgtccttctacagagtctcttctgacacactgatc
cacctccacaccttctacaccacattcactgaacctctgtatcctgggtttgggtttggg
tcttatggttcctcagtgtatgtgtgtcctctgtctgagtga
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