Scomber scombrus (Atlantic mackerel): 133997992
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Entry
133997992 CDS
T10651
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133997992
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133997992
NCBI-ProteinID:
XP_062293715
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Position
17:complement(1287204..1293455)
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AA seq
1188 aa
AA seq
DB search
SEVLSGQSVQQHQTQLDSIFMLLEENISRFVKNELKKMQKALSPDYPECLESQREDEEVL
DGEEEEQRRSSREAFLKITLHFLRRMKQEELAERLQSKTFCTQCQLKLKSNLKEKFQCLF
EGIAKAGNPTLLNQIYTPLYITEETTAEVNDEHEIRQIETASRKPVRPETTIRQEDIFKA
SPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRDLNVLKEKKY
SLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVL
LTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRFRDEEHA
RTIISHIKTSRSLHIMCHIPVFCWITATVLEVVLKSRDGGELPKTLTEMYIHFLVVQSKL
KKVKYDGGAGTDPHWSPDSRMMIESLGKLAFEQLQKGNLIFYESDLTECGIDIRAASVCS
GVFTQVFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTFIKSGVNLLAEEQTTSWLSKVF
KEKNNLKHLYQTSVDEALKSPNGHLDLFLRFLLGLSMKTNQTYLNGLLKKTGRSFHTNQV
IVEYIKKKISENVSAERSINLFHCLNELNDRSLVEEIQQYLRSGSLSTDLLSPAQWSALG
FILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNTAMLTECNLSERSCAALSSVLSSQ
SSSLRELDLSNNNLQDSGMKILSAGLESPHCTLETLRLSGCNLSERSCTALPSVLISQSS
CLRDLDLSNNNLQDSGTKILSAGLESPHCTLETLRLTVCNLSERSCAALSSVLSSQSSSL
RDLDLSNNNLQDSGVKQLSAGLESPHCTLETLRLTDCNLSERSCAALSSVLSSQSSSLRD
LDLSNNNLQDSGVKQLSAGLESPHCTLETLSLSGCLITEEGCASLASALNSNPSHLRELD
LSYNHPGDSGEKLLSDGLKDPHWRLDTLRVDHGGEHRLKPGLKKYFCELTLDTNTVHRKL
KLSENNRKVTCVEEVQSYPDHPDRFDNWVQLLCRNGLTGRCYWEVEWRGGINISVSYRGI
SRKEYSDDSRFGRNGQSWSLNCSDGGYSVCHNSRGTYIPSSSSSSSSSVSNRVAVYVDCP
AGTLSFYRVSSDTLIHLHTFNTTFTEPLCPGFGFSLRPGASVSLCPLS
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
tcagaggttctcagtggtcagtctgtccagcagcatcaaacacagctggactccatattt
atgctgctggaggagaacatcagcaggtttgtgaagaacgagctgaagaagatgcagaag
gctctgagtccagattacccagaatgcttagagagtcagagggaggatgaggaggtgttg
gacggtgaggaggaagagcagaggaggagcagcagagaggcatttctgaagatcacactg
cacttcctgaggagaatgaagcaggaggagctggctgagcgtctgcagagcaagacattt
tgtacacagtgccaacttaaactcaagtctaacctgaaggaaaagttccagtgtctgttt
gaggggatcgctaaagcaggaaacccaacccttctgaatcagatctacacaccgctctac
atcacagaggaaacgactgcagaggtcaatgatgaacatgagatcagacagattgaaaca
gcatccaggaaaccagtcagaccagaaacaacaatcagacaagaagatatctttaaagcc
tcacctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcattggg
aaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggac
atacacttcacatttccattcactttcagagacctgaatgtgctgaaagagaaaaagtac
agcttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgcagg
tttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctg
gacttccacaacactgagatcctgactgatgttacagagtccacctcagtggatgtgctg
ctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacga
cctgcagcagccaatcagatccctcctgagtgtgttggcatggtgacagaggtcagaggg
ttcactgacccacagaaggaggagtacttcaggaagagattcagagatgaggagcacgcc
agaaccatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatccca
gtcttctgctggatcactgctacagttctggaggttgtgttgaaaagcagagatggagga
gagctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaactg
aagaaggtcaagtatgatggaggagctgggacagatccacactggagtccagacagcagg
atgatgattgagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctgatc
ttctatgaatcagacctgacagagtgtggcattgatatcagagcagcctcagtgtgctca
ggagtgttcacacaggtctttaaagaggagagagggctgtaccaggacaaggtgttctgc
tttgtccatctgagtgttcaggagtttctggctgctcttcatgtccatctgacattcatc
aagtccggagtcaatctgctggcagaagaacaaacaacatcctggttgtctaaagtcttt
aaagagaaaaataatctaaaacatctctaccagacgtctgtggacgaggctttaaagagt
ccaaatggacacctggacttgttcctccgcttcctcctgggtctttcaatgaagaccaac
cagacttacctaaatggtctgctgaaaaagacaggaagaagcttccacacaaatcaggtg
atagttgagtacatcaagaagaagatcagtgagaatgtgtctgcagaaagaagcatcaat
ctgttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacagtac
ctgagatcaggaagtctctccacagatttactgtctcctgctcagtggtcagctctgggc
ttcatcttactgtcatcagaaaaagatctggatgtgtttgacctgaagaaatactctgct
tcagaggaggctcttctgaggctgctgccagtggtcaaagcttcaaatacagctatgctg
actgaatgtaacctgtcagagagaagctgtgcagctctgtcctcagttctcagctcccag
tcctctagtctgagagagctggacctgagtaacaacaacctgcaggattcaggaatgaag
attctgtctgctggactggagagtccacactgtacactggaaactctcagactgagtggc
tgtaacctctcagagagaagctgtacagctctgccctcagttctcatttcccagtcctcc
tgtctgagagatctggacctgagtaacaacaacctgcaggattcaggaacgaagattctg
tctgctggattggagagtccacactgtacactggaaactctcaggctgactgtctgtaac
ctctcggagagaagctgtgcagctctgtcctcagttctcagctcccagtcctctagtctg
agagatctggacctgagtaacaacaacctgcaggattcaggagtgaagcagctttctgct
ggattggagagtccacactgtacacttgaaaccctcaggctgactgactgtaatctctca
gagagaagctgtgcagctctgtcctcagttctcagctcccagtcctctagtctgagagat
ctggacctgagtaacaacaacctgcaggattcaggagtgaagcagctttctgctggactg
gagagtccacactgtacactggaaactctcagtctgtcaggatgtctgatcacagaggaa
ggctgtgcttctctggcctcagctctgaactccaacccctcccatctgagagagctggac
ctgagctacaatcatccaggagactcaggagagaagcttctgtctgatggactgaaggat
ccacactggagactggacactctcagggtggaccatggtggagagcacaggttaaaacct
ggtctgaagaagtatttctgtgaactcacactggacacaaacacagtacacagaaaactc
aaactatctgaaaacaacaggaaggtgacatgtgtggaggaggttcagtcatatcctgat
catccagacagatttgacaactgggttcagctgctgtgtagaaatggtctgactggtcgc
tgttactgggaggtcgagtggagagggggaattaatatatcagtgagttacagaggaatc
agcaggaaagaatacagtgatgacagcaggtttggaagaaacggtcagtcctggagtctg
aactgctctgatggtggttactctgtttgtcacaatagcagaggaacatacatcccctcc
tcctcctcctcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcct
gctggcactctgtccttctacagagtctcctctgacacactgatccacctccacaccttc
aacaccacattcactgaacccctgtgtcctgggtttgggttcagtcttcgtcctggtgcc
tcagtgtctctgtgtcctctgtcttag
DBGET
integrated database retrieval system
