Scomber scombrus (Atlantic mackerel): 133997996
Help
Entry
133997996 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133997996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133997996
NCBI-ProteinID:
XP_062293719
LinkDB
All DBs
Position
17:complement(1462519..1471614)
Genome browser
AA seq
1155 aa
AA seq
DB search
MDQSEDREEGVPPSKSSLCGEHDSQTKKQHRPDSDGPGPELTCESMKSDLSLDEIIFFKR
EHRSADQRIHQQRPDSPESGCVSMKSDWSMTKPIHFKHEHQSADQRIHQQRPDSPESGCV
SMKSDWSMTKPIHFKHEHQSADQRSEYKMFHQQSSEVLSGQSVQQHQTQLDSIFMLLEEN
ISRFVKNELKKMQKALSPDYPGCLESQSEDEEVLDGEEEEQKRSSREAFLKITLHFLRRM
KQEELAERLQSRTRAGRCRYKLKSNLQKKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGT
AEVNDEHEIRQIETASRKPVRPETTIRQEDIFKASPGRDQPIRTVMTKGVAGIGKTVLTQ
KFTLDWAEEKANQDIHFTFPFTFRELNVLKEKKYSLVELVHHFFTETKEAGICRFEEFQV
VFIFDGLDECRLPLDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQ
IPPECVGMVTEVRGFTDPQKEEYFRKRFRDEEQASTIFSHIKTSRSLHIMCHIPVFCWIT
VTVLEDVLKSREGGELPKTLTEMYIHFVVAQSKVKEVKYHGKAGTDPHWSPETRKMIKSL
GKLAFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQVFKEERGLYQDKVFCFVHLSV
QEFLAALHVHLTFIKSGVNLLAEEQTTSQTHFYQSAVDEALKSPNGHLDLFLRFLLGLSL
QTNQTLLRGLLTQTGSSSQTNQETVEYIKKKISENLSAERSINLFHCLNELNDRSLVEEI
QLSLRSGSLSTDKLSPAQWSALGFILLSSEKDLDVFDLKKYSASEEALLRLLPVVKASNK
ALLSSCNLSERSFAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCTLETLS
LSGCLITTEGCASLASALSSNPSHLRELDLSYNHPGDSGEKFLSAGLEDPHWRLDTLRVD
HGGEHRLKPGVKKYFCELTLDTNTVNRNLKLSDNNRKVTCVEEDQSYPDHPDRFNDCPQL
LCSNGLTGRCYWEVEWRGRVNVSVTYRGIRRKGHSEDRLFGYNDQSWSLYCSVNDDYDYS
VCHNKTVTYISSSSSSVSDRVAVYVDCPAGTLSFYRVSSDTLIHLHTFYTTFTKPLYAGF
RVCPSSSVSVCPLSE
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaaaagcagcacagaccagactctgatggacctggacctgaa
ctcacctgtgagtccatgaagagtgacttgtctctggacgagattattttctttaaacgt
gaacatcggtctgctgatcagaggatccatcagcagagaccagattctcctgaatctggc
tgtgtgtccatgaagagtgactggtctatgactaaaccgattcacttcaaacatgaacat
cagtctgctgatcagaggatccatcagcagagaccagattctcctgaatctggctgtgtg
tccatgaagagtgactggtctatgactaaaccgattcacttcaaacatgaacatcagtct
gctgatcagaggtcagaatataaaatgtttcatcagcagagctcagaggttctcagtggt
cagtctgtccagcagcatcaaacacagctggactccatatttatgctgctggaggagaac
atcagcaggtttgtgaagaacgagctgaagaagatgcaaaaggctctgagtccagattac
ccgggatgcttagagagtcagagtgaggatgaggaggtgttggacggtgaggaggaagag
cagaagaggagcagcagagaggcatttctgaagatcacactgcacttcctgaggagaatg
aagcaggaggagctggctgagcgtctgcagagcagaactcgtgctggcaggtgtcgatat
aaactcaagtctaacctgcagaagaagttccagtgtctgtttgaggggatcgctaaagca
ggaaacccaacccttctgaatcagatctacacaccgctctatatcacagagggagggact
gcagaggtcaatgatgaacatgagatcagacagattgaaacagcatccaggaaaccagtc
agaccagaaacaacaatcagacaagaagatatctttaaagcctcacctggaagagatcaa
ccaatcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacag
aagttcactctggactgggctgaagaaaaagcaaaccaggacatacacttcacatttcca
ttcactttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgtt
catcacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggtt
gtgttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacaatgag
atcctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagg
gggaaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcag
atccctcctgagtgtgtcggcatggtgacagaggtcagagggttcactgacccacagaag
gaggagtacttcaggaagagattcagagatgaggagcaggccagcactatcttctcccac
atcaagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcact
gttacagttctggaggatgtgttgaaaagcagagagggaggagagctgcccaagaccctg
actgagatgtacatccacttcgtggtggctcagtccaaagtgaaggaggtcaagtatcat
ggaaaagctgggacagatccacattggagtccagagaccaggaagatgattaagtcactg
ggaaaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctg
acagagtgtggcattgatatcagagcagcctcagtgtactcaggagtgttcacacaggtg
tttaaagaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctgagtgtt
caggagtttctggctgctcttcatgtccatctgacattcatcaagtctggagtcaatctg
ctggcagaagaacaaacaacatcccagacacatttctaccagagtgctgtggacgaggcc
ttaaagagtccaaatggacacctggacttgttccttcgcttcctcctgggtctttcactg
cagaccaatcagactctcctacgaggtctgctgacacagacaggaagtagctcacagacc
aatcaggaaacagtcgagtacatcaagaagaagatcagtgagaatctgtctgcagagaga
agcatcaatctgttccactgtctgaatgaactgaatgatcgttctctagtggaggagatc
caactgtcccttagatcaggaagtctctccacagataaactgtctcctgctcagtggtca
gctctgggcttcatcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaa
tactctgcttcagaggaggctcttctgaggctgctgccagttgtcaaagcctccaacaaa
gctctactgagtagctgtaacctctcagagagaagctttgcagctctgtcctcagttctc
agctcccagtcctctagtctgagagatctggacctgagtaacaacaacctgcaggattca
ggagtgaagcagctttctgctggactggagagtccacactgtacactggaaactctcagt
ctttcaggatgtctgatcacaacagaaggctgtgcttctctggcctcagctctgagctcc
aacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagag
aaatttttgtctgctggactggaggatccacactggagactggacactctcagggtggac
catggtggagagcacaggttaaaacctggtgtgaagaagtatttctgtgaactcacactg
gacacaaacacagtaaacagaaacctcaaactgtctgacaacaacaggaaggtgacatgt
gtggaggaggatcagtcatatcctgatcatccagacagatttaacgactgtcctcagctg
ctgtgtagtaatggtctgactggtcgctgttactgggaggtcgagtggagaggaagagtt
aatgtatcagtgacttacagaggaatcagaaggaaaggacacagtgaagaccgattgttt
ggatataatgatcagtcctggagtctgtactgctctgttaatgatgattatgattactct
gtctgtcacaataagacagtaacatacatctcctcctcgtcttcctctgtctctgacaga
gtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcgtctgac
acactgatccacctccacaccttctacaccacattcactaaacctctgtatgctgggttt
agggtctgtcctagttcctcagtgtctgtgtgtcctctgtctgagtga
DBGET
integrated database retrieval system
