Scomber scombrus (Atlantic mackerel): 133998007
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Entry
133998007 CDS
T10651
Symbol
tdrd15
Name
(RefSeq) tudor domain-containing protein 15
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Gene silencing
piRNA pathway
133998007 (tdrd15)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
TPR_27
SAP30_Sin3_bdg
Motif
Other DBs
NCBI-GeneID:
133998007
NCBI-ProteinID:
XP_062293728
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All DBs
Position
17:complement(2183173..2190776)
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AA seq
1962 aa
AA seq
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MALVSSEGSAHDSVVTDAAAMLSMMGSEYQKSKDSGPSGPRALWPVDLKLTHLDWNPEAT
LIHFQAQYLSICELDYNILQGEIQNIPKTKTAVNIGEFCLVEDLTSARWYRGRVQNRKED
LFDVFLIDHGNVLSVDIDRVSSCSNDLFILPPKIVCGFLANVLMLHGFSSSVVDDYLSCL
IGKNVTGYIQALLPHKVLLLEAPDINENLVRHGFGRHVDTDTFLLLAEMLTEVPLKQNID
PVPDLLIEKQRGQEYCFKSGLQGYEEILSFCGPKLSCGTRAKVRVTAAVNPGLLYCQMVS
METDLREMSKKLADVFEYRTKDHHYKTPENLGLLCSVKGKDGNWYRGFVQFLPVNSQVRV
LFIDYGFIESVKVENVHRLPPDFYTAPIMAFPCSLSALNVQDEAVKTQQLSFLKAGLLGE
VLDVEISHFEEKQHLYSITVFSAQDNHVKEPESVQELPRKKVQSDFETEEVSAQGGYLFC
DTIIGEALDKTLEEEEVQEGSVFVGYVEHIQNPNHFWIRTQKRNNEFEEMMTQLADHFSD
VKLDEDTLVNPDLGTMCCAVYEEDMHFYRGVVIDTLEHGAEVLFVDFGNIEKVPHMLIKK
IPETFSSKSAFAICCSLANVVPLDEVWTSTATDFFRRAVSNKAMLLHVVQMRKNKCVVDL
FEMGSDNSPTISELLISSKQAEYWNSIRIGAMVQNKTEVTEKTTRSLRYCVTPDISENTE
WDDLGQNENTGQNEIKKVQVATSFKALSIKPGCEFAVCCSFIISPSEFWCRPLEKVLALE
ELMSKIQQYYKTHTVPLQSGDSCCVANSPLDGIWYRAFITDRQKYQVRVILVDYGITIQL
KEHNLQTIMPEFVDLEGQAFRCSLYNLIEPVETKSCGGWNPEVCNSLKAFSNSPGHLRCK
VVSQLSVKNKELYNVVDLYNTQTQQSITKVLVKQGLAREATLSTKQLSTVSPESFVYSSF
DLDIKSQEKTYVTHVSNHCEVYCHLERNTELIEELEEKILEESEKMKQASRRAVVRKLCL
AKYLDGIWYRGLAHPVESPLHLSVFFVDYGNTIISEKTHVMFIRRDSADLLYTPVQAVKF
NLSSVSKEEHYADVKEWLDGAILNKQVRAVIVGKSDDGSFDVELYDGEVNINEKVKELIV
SCSPKPQTFVSLNASSTKTKSQNSKVKNQTELHDTNTKNTESCIPHKHTPVKQQREHHDA
KTEQPEHTEETEIPQLSYLPDIKVSMGFRAKCFVSHIDSVDRFFLQLSEDEPAILKMGED
LSSGVSRESLKTTPSLRINDLVLAEYEEDGALYRSVVKDHEGTCYTVEFVDYGNSAVIDK
EKIYSIPQEYLSQPRLSISCSLLDTSTYKNDTSFIDAVMEKPLMVDFVRQCGTHWQVKVE
VLGEAVGLPTALEAAVETSAATKKGEEASSSSSEIDEKVRSCEQTSLKVREEETRSESEA
RTVEGEKLSLKPPPVSLSTKLKVKSCRGYNKKNTRNKSYSKKIQRKTSNSPFKVKNDCAE
KVITSIVQAKDTENGVVLSVLSNGRFYVRLNKTSDKLAALESRIAVNLHRCDIVAEEDMK
QGLKCLVQVDKDSQWKRAVVQHVGQDKCQVLLVDHGLTEEIPTGAIRRQCSDMTKIPNLA
VLCKMNCLGFSQGGDANKWEILKPMIDQEVKLVFVHYSEVDKLWMVEIVINGLFLNNHIT
SITSLAETQNMAAEELTLVTSPRQLTFAPIHIDKAYSGIAAAVATPFEFCVVLEDLLLVM
NKVSVMLGDLPGKMPPLPEAHLIPGACCMLKSDTKNKWCRAEIIHADTTIVLNLADYGHC
ECVPYDDISKLKKLPDELIKLPKMTYPCILRGVKPVGLDGEWTDEAAVFFQQCLYQRNLQ
IFFREFVSNTNWKVDVLANGIHVAKELVDAGHAGYVDVMLGLRFQEQSLSKACPPAPDSE
EECGPDDEGLDRNSDLSSDVDDEAEGKMAPDIESGSSQCLLM
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggctttagtgagttctgaaggttctgctcatgattcggtcgtcactgatgctgctgcc
atgctgtcaatgatgggctctgaatatcagaagtctaaggattcaggtccatctggacct
cgcgccctttggccagtggacctcaagttaactcacctggactggaaccctgaagctacc
ctgatacacttccaggcacagtacctgtccatatgtgaacttgactacaacatcttacag
ggagaaatacagaacataccaaagactaaaactgcagtgaatataggagagttttgcctc
gtagaagatttgacttcagcccgctggtacagaggaagagttcagaaccgaaaagaggac
ttgttcgatgtgttcctcatagatcacggcaatgtcctgagcgttgacattgaccgcgta
tcttcctgttcaaacgatctgttcattctgcctcccaagatagtttgcggatttcttgca
aatgtgctgatgcttcacggcttttcctcttctgtagtggatgattacctctcatgcctg
attggaaagaatgtcacaggttacatccaagccctcctgccccacaaagtcctgctattg
gaagcccctgacatcaacgaaaaccttgtcagacatggttttgggaggcacgtggacaca
gacactttcctcctcttggctgagatgctcacggaagtgccactcaaacaaaatatagat
ccggttcctgacttactcattgaaaagcaaaggggacaagaatattgtttcaaatctgga
ttgcagggatatgaagaaattctgtctttttgtggacccaaattgagttgtgggacacgt
gctaaagtgcgagtaactgctgctgttaaccctggcctgctttactgccagatggttagt
atggaaacagatcttagggaaatgtcaaagaagctggctgacgtttttgagtacagaacc
aaagatcaccattacaagactccagaaaaccttggtcttctctgctcagttaaaggcaaa
gatgggaactggtacagaggctttgtgcagtttctcccagtaaactctcaagtgcgagtg
ttgttcattgattacggattcatcgaatctgtaaaagttgagaacgtccacaggttgcca
cctgatttctatacagccccgatcatggcattcccctgctcactctccgccctgaatgtt
caggatgaggccgtcaaaactcagcagttgagtttcctcaaggcaggcttgctcggagaa
gtattggatgtggagataagtcattttgaggaaaagcagcatctgtactctatcacggta
ttcagtgctcaagataatcatgtgaaggaaccagagtctgtgcaggagcttcccagaaag
aaggtgcagtccgattttgagacagaagaagtgtcagctcagggtggttatttattctgt
gacacaatcattggtgaagcattagataaaaccctggaagaagaagaggtgcaggagggc
tcagtgtttgtgggctacgttgagcatatccaaaatcctaaccacttctggatcagaaca
caaaaacgcaataatgagtttgaagaaatgatgacacaattggcagatcactttagtgac
gtgaagctggatgaagacacactggtgaatcctgatcttggaacaatgtgctgtgcagtg
tatgaggaagacatgcatttctacaggggtgtagtgattgacacactggagcatggagct
gaagtcctttttgttgatttcggaaacattgagaaagtgccacatatgttgatcaagaaa
atacctgagacattttccagcaaatcagcgtttgccatctgctgttctctagcaaatgtt
gttcctttggatgaagtctggaccagcaccgccactgactttttcagacgagccgtgtca
aacaaagccatgctactccatgttgtccagatgagaaaaaacaaatgtgttgttgatctc
tttgaaatgggaagtgacaacagtccgactatcagtgaattgttgatatcttcaaaacaa
gctgaatactggaacagcatccgtataggggctatggtgcaaaataaaactgaggtgaca
gaaaaaacaacaagatccttaaggtattgtgtaaccccagacatcagtgagaatacagaa
tgggatgatttggggcagaatgagaacacaggccaaaatgaaatcaagaaggttcaagta
gctaccagcttcaaagctttaagcatcaagccaggttgtgagttcgctgtgtgttgctcc
ttcattatctccccatcagagttttggtgccggcctctagagaaggttctggctttggag
gaactgatgagcaaaattcagcagtattacaagactcacacagtccccctccagtctggg
gattcatgttgtgttgccaactcacccctggatggaatatggtacagagccttcatcaca
gatagacagaaataccaagtcagagtgatattggttgactatgggattaccatccagctc
aaggagcataatcttcagaccataatgccagaatttgttgatctggaaggacaagctttc
aggtgcagcctttacaacctcattgaacctgttgaaaccaagagctgtggcgggtggaat
ccagaggtgtgcaactctctcaaagcattttccaatagccctggccatctaagatgtaaa
gttgtctctcagttgagtgtgaaaaacaaagaactgtacaatgtcgtggacctctacaac
acccaaactcagcagagcataacaaaagtgcttgtgaaacagggcctggcaagagaagca
acactctcaacaaagcaactgtcaacagtgtctcctgagtcttttgtctactcttcattc
gacctagacatcaaaagccaagaaaaaacctatgtcactcatgtaagcaaccactgcgaa
gtctactgccaccttgagagaaacactgagctaatcgaagagcttgaagagaaaatctta
gaggagagtgagaaaatgaagcaagccagtaggagagctgtagtaaggaagctgtgccta
gcaaaatacttggatgggatatggtacaggggcttggcacatcctgttgagtcacccctg
catctcagtgtattctttgtggattatgggaacacaatcatatctgagaaaacccatgtc
atgtttatccgcagagactctgctgatttattgtacacacccgtgcaagctgtgaaattt
aacctgtcttcagtgtccaaggaagagcactatgcagatgtcaaggaatggcttgatgga
gccatactcaacaagcaagtgagagctgtcattgttggaaagagtgacgatgggtcattt
gatgttgaactgtatgatggagaggttaacatcaatgagaaggtaaaggagctcattgtc
agttgttcacccaaaccacagacgtttgtgagtttaaatgcaagcagtacaaagacaaaa
tctcagaactcaaaagtgaaaaatcaaacggagctccatgatacaaacactaaaaataca
gagagctgtatccctcataaacacactccagtaaaacaacaaagggagcaccatgatgca
aagacagaacagcctgaacacactgaggaaactgagattcctcagctctcatatttgccc
gacataaaagtgagcatgggctttagggcaaagtgttttgtctcccacattgactcagta
gacagatttttccttcagctttcagaggatgaacctgccatcttgaaaatgggtgaagat
ctcagctcaggtgtctccagagagtccttgaagactaccccatctttgagaatcaatgac
cttgttctggctgagtatgaggaggacggtgctctgtatcgttcagtcgtgaaggaccat
gaagggacctgttacacagttgagtttgtggactatggaaactcagcagtcattgataag
gagaagatctactcaataccacaggagtatctctctcagccaagattaagtatatcatgt
tccctgctggacacaagcacttacaaaaatgacacgtctttcattgatgctgtaatggag
aagcctctcatggttgactttgtccgtcaatgtggaactcattggcaagtcaaggttgag
gttcttggtgaagcagttggtcttccaacagcacttgaagcagccgttgaaactagtgct
gcaactaaaaagggagaagaagcttcttcaagttcatctgaaatagatgagaaagtgaga
tcctgtgaacagacctccctcaaagttagagaggaggaaacaagaagtgaatctgaagct
aggactgttgaaggtgaaaaactctcactcaaaccaccacctgtctcactgtcaaccaaa
ctgaaggtaaaatcctgcaggggctataacaaaaaaaacaccagaaataagagttattct
aagaagattcaaaggaaaacttcaaactcacctttcaaagtgaagaatgattgtgcagaa
aaagtcataacttcaattgttcaagctaaagacacagagaatggtgttgttctgtcagtc
ctgagtaatggacgtttttatgtaaggctaaataagaccagtgacaaacttgctgcattg
gaaagtcgcatcgctgtaaacctacacaggtgtgacattgtggctgaagaggatatgaaa
caaggcctcaagtgcttagttcaggtagacaaagacagccagtggaagagggctgttgtt
cagcatgtaggtcaggacaaatgccaggtcctcctggtggatcatggactaacagaagaa
attccaactggcgccatccgacgacagtgcagtgacatgacaaaaatcccgaaccttgct
gtgttgtgcaagatgaactgccttgggttcagtcagggaggagatgccaacaaatgggag
attctcaaaccaatgatagaccaagaagtcaagctggtgtttgtgcattactcagaagtc
gataaactttggatggttgaaatagtcattaatggactgttcttaaataatcatatcaca
tcaatcacatctctagcagaaacccaaaatatggcagcagaagaacttaccctggtcaca
agccctcgtcagctcacctttgctcctatccatatagacaaagcatattctggcattgct
gctgcagttgctacacctttcgagttctgcgttgttctggaagacttgcttctggtcatg
aacaaagtgtccgtcatgttgggtgacctccctgggaagatgccccctctccctgaagcc
cacctcatccctggcgcctgctgcatgttgaaatcagacaccaagaacaaatggtgcagg
gctgaaataatacatgctgacaccacaatagtcttaaacctggcagattatggccattgc
gaatgtgtgccatacgatgatatctccaagctgaagaagcttccagatgagctgataaaa
ctcccgaaaatgacgtacccctgcatcctgagaggggtgaagccagttggattggacgga
gagtggaccgatgaggcagcggtcttctttcagcagtgtttgtaccagaggaaccttcag
atcttcttcagagagtttgtatctaacacgaactggaaggtggacgttctggcaaatggt
atccatgtggccaaggagctggtggatgctggacacgctggttacgttgacgtcatgcta
ggactaaggttccaggagcagagcctcagtaaagcctgtcctccagcacctgacagtgag
gaagagtgtggacctgacgatgaaggcttggacaggaattcagatctttcttctgacgtc
gatgatgaagctgaaggaaagatggcacctgacattgagtccggatcgagtcaatgtctc
ttgatgtga
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