Scomber scombrus (Atlantic mackerel): 133998914
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Entry
133998914 CDS
T10651
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04910
Insulin signaling pathway
Brite
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
133998914 (srebf1)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133998914 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
133998914 (srebf1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133998914
NCBI-ProteinID:
XP_062293937
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Position
18:15516472..15531849
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AA seq
1191 aa
AA seq
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MNNLSFDDASLDNLDPTLSLTDPSDIDTALLSDIDDMLQLINNQDIEFGGLFDPPYTGPV
PTQELPPLTQSITSAAPPSTTPTPTSTSSSSILSSSPHLDALLGPPITRSSTTPDKAFQP
PTFQQSPLAQVSNSTPRQQPASPQQAQSLRQPQVEQPQPILSQSPPAQAASPHGSPGPNP
VFSSTPQALFTSPAPQTPPQLQPQPQPQTQLQAPVQVQNQQQNRTNYSSPNSFTTGSPGT
VSQPVTSLSSSPPLVQPVAIQAQLQGLTTTSPLLTTSVSPSAQTITSHVQQLPVLLQPQF
IKAESLLLTTLKHDPCIVTTVASPTSLATTSPVQSTSLQAFMGGGTILTTVPVMVDTEKL
PINRIAISGKPVGQPHKGEKRTAHNAIEKRYRSSINDKIIELKDLVAGTEAKLNKSAVLR
KAIDYIRYLQQSNQKLKQENMALKMSAQKDKSLKDLVAMEVDAPADVKNELPTPPASDVG
SPTSFSHCSSDSEPDSPMGEDTKPNVGVLNKSASGGSAGGMLDRSRMALCAFTFLFLSLN
PLAALLCSPDSSSAANTAATATHSAGRSVLGIDIAADSWGWMDWMLPTILVWLLNGILVS
GVLIRLLVYGEPVTRPHSGSSVLFWRHRKQADLDLARGDFAQASQNLRTCLKALGRPLPT
SQLDLACAALWSLLRFCLQRLWVGRWLAARAGGLRSDRPLQEDACKSSRDAALVYHRLHQ
LHMTGKLNGSHLSAVHMALSAVNLAECAGSCLPVASLAEVYVSAALRVKASMPRILHFTS
RVFLSSARQACLSSSGSVPPAMQWLCHPLGHRFFVDGDWAIRSTPKDSIYSQAGNTVDPL
AQVTQAFREHLLEKALYCVAQPHGEKSTSQGEGEYADALEYLQLLISASDAAGATSQSFA
IGSNMATVTGCDPHSKWWSSVAVVIINWLQGDDAAAERLYPTVEHLPRSLQNAESLLPKA
CLNTFRAVRALLSKPENCQLSLSFSDKASALLRDSLNLGPHCHSSSLDKVVQLLLCDLLL
VMRTNVWRLQQQGTSPVGSGSVGTSGSVGVHQASPPELQGFQQDLSSLRKLAHSFRPAMR
RLFLHEATARLMAGASPTRTHQLLDRSLRRRATPGAKTEECETRPGQREQAEAVMLACRY
LPPSFLSAPGQRVGMLADAARTLEKLGDKRTLHDCQQMIIKLGSGTTVTNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacctgtcgtttgacgatgcttctctggataatctggacccaacactgtcgctt
actgaccccagcgacatcgacacggccctcttaagcgacattgatgacatgctccagctc
atcaacaaccaggacatagagtttgggggactctttgatcctccatacacagggccggtc
cccacccaagagctgccccctctgacccagtccatcacctcagccgcccctccctccacc
actcctacacctacatccacgtcatcctcctctatcctcagcagtagcccgcacctggat
gctctcctgggccctcccatcacccgcagctccaccaccccagacaaggctttccagcca
cccaccttccagcagtcccccctggcccaggtatccaactccaccccgcggcagcaacca
gcctccccgcagcaggctcagagcctcagacagccccaggtggaacagccccagcccatt
cttagccagtctcccccggcccaggcagcctcacctcatggatcaccaggaccgaaccca
gtattcagctccacaccccaggccctcttcacttcccctgcaccacagactccgccccaa
cttcaaccccaaccccagccgcagacacagcttcaggctccggttcaagttcagaaccag
cagcagaatcggaccaactacagcagtccgaacagcttcacaactggcagtccaggcaca
gtgagccaaccagtcaccagcttgtcatcctcacctccacttgttcagccagtggccatt
caggctcagctccaagggctgaccacaacctctcctctgctcaccacgtcagtaagccca
tcagctcagaccatcacatctcacgtacagcaactacctgtgttgctgcaaccacagttc
atcaaggctgaatctctgttgctgaccaccctgaagcatgacccctgcatagtcactact
gtggcctctcccacctctttggccacaacttccccagtacagagcacttcactgcaggcc
tttatgggcgggggcaccatcctgactacggtgcctgtcatggtggacactgagaagctg
ccaatcaaccgcatcgcaatcagtggtaaaccagtcggccagccacacaagggggagaag
cgcacagctcacaatgcaattgagaagcgctaccgctcttccatcaatgacaagatcatt
gagctcaaagacctggtggccggtactgaggccaagctcaataagtctgcagtgctcagg
aaagccattgactacatccgttacctgcagcagtccaaccagaaactcaaacaggagaac
atggctcttaaaatgtcagcccagaaagacaagtctctcaaggacctcgttgctatggag
gtggatgcaccggctgatgtgaagaacgagctgccgaccccaccagcctctgacgtgggc
tcgcccacttctttctcacactgtagcagcgactcagagcctgacagtccaatgggggag
gacaccaagcccaatgtaggcgtgttgaacaaatcagcatctggtggcagcgctggcggc
atgttggaccgttcccgtatggcgctgtgtgctttcaccttcctcttcctctccctcaac
cccctggctgccctgctctgctcacccgacagcagctcagctgctaatactgcagccacc
gccacccattcagcaggcaggagcgttctgggcatagatattgcagctgactcatggggc
tggatggactggatgctgccaacgatactggtgtggctactgaacgggatcctggtgtca
ggagttctgatccgactgttggtttatggagagcctgtaaccagaccacactctggatcc
tctgtcttgttctggaggcaccgcaagcaggctgacctagacttagccagaggtgatttt
gcccaggccagtcagaacctgcggacctgtctgaaggctctcggtcgccccttacccacc
tcccagttagacctggcctgtgctgcactgtggtccctgctacgcttctgcctccagcgc
ctctgggtgggtcgctggctggctgccagagctggagggctgcgttctgaccgccccctg
caggaggacgcctgcaaaagcagccgtgacgccgccctggtctaccatcgtctgcaccag
ctacacatgacaggtaagctgaatgggagccacctttcagcagtgcacatggctttgagt
gcagtgaacctggcagagtgtgctggctcctgtctgcctgttgcctctctggctgaagtc
tatgtctctgcagctctacgggtcaaagccagtatgccaaggatcctgcatttcacctct
cgtgtgttcctgagcagtgcccgccaggcatgcctgtcatctagtggcagtgtgcctcca
gctatgcagtggctctgtcacccacttggtcatcgcttctttgtggatggggattgggcc
attcgcagcaccccaaaagatagcatctacagtcaggctggcaatactgtggatcctctg
gcccaggtgacccaggccttcagagagcacctcctggagaaggctctgtactgtgtcgcc
cagccacatggagagaaaagcaccagccagggagagggggagtacgctgatgccctggag
tatctccagctgctgattagtgcatcggatgcagccggtgccacctcacagtccttcgcc
attggctccaacatggctactgtgactggttgcgacccccactccaagtggtggtcctct
gttgctgtggtgatcatcaactggctccaaggagatgatgctgcagcggagagactgtat
ccgacagtggagcacctgccccgcagtctgcagaacgcagagagtcttctgccaaaggcg
tgtctgaacacattcagggctgtgcgggctctgctgtccaagccagaaaactgccagttg
agtttgagcttcagcgacaaggccagcgccctgctccgagacagcctcaacctaggacca
cactgccacagctccagtttagacaaggttgtacagttgcttttgtgtgacctgttgttg
gtgatgaggaccaatgtgtggcgtctgcagcagcaggggaccagtcctgtggggtcaggg
tcggtgggcaccagcggctctgtgggcgtccaccaggcctccccacctgagctgcaaggc
tttcagcaagatctcagctccctacgcaagctggcacacagcttcaggcctgcgatgcga
agattgttccttcatgaagctacagccaggctgatggcgggggccagtcccacccgcaca
catcagctcctggatcgctcgctacgacgcagagcaacgcctggagccaaaacagaggag
tgcgagacacggccaggccagcgggagcaggcagaggccgtgatgctggcgtgccgctac
cttcccccctccttcctgtcggctcctggccagagggtgggcatgctggcggatgcagcc
cgcaccctggagaagctgggagacaagaggaccctccacgactgccagcaaatgatcatc
aagctgggcagcggcaccaccgtcaccaacagctag
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