Scomber scombrus (Atlantic mackerel): 133998939
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Entry
133998939 CDS
T10651
Symbol
glis2b
Name
(RefSeq) zinc finger protein GLIS2b
KO
K09233
zinc finger protein GLIS2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133998939 (glis2b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133998939 (glis2b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
133998939 (glis2b)
Cilium and associated proteins [BR:
ssco03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
133998939 (glis2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_6
zf-C2H2_8
zf-C2H2_4
Zap1_zf1
zf-met
Motif
Other DBs
NCBI-GeneID:
133998939
NCBI-ProteinID:
XP_062293976
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Position
18:complement(14155174..14186353)
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AA seq
486 aa
AA seq
DB search
MLSLDEPLDLKLPRRANGRDRGARSPPLSPLHPKRARQLRMADDGTAVIEPASPASPHTG
MQVVPHDRTETPTPPAVDLSLSPSSRHTPSSPEMTNGNYVHSGNSHISQAFQFFVPIGAG
AGLHLPSSMFLAQTSEKRASPDLSADEQLACHWKKCHLLFDSLQDLVDHVNDFHVKPEKD
SGYCCHWEGCARKGRGFNARYKMLIHIRTHTNEKPHRCPTCNKSFSRLENLKIHNRSHTG
EKPYICPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKMVGCLKRYTDPSSLRKHIKAHGH
FVAQEHGSPGGVGSMLKGSQSGVLASGGGKDSELSYVSGAHIIIPGAAAALLGSHALQGL
GGSLPLSPLSPRPLDLSTLGCPNSPPGSLGGTSILSFNGSTLGLTKSPLLSPAFPSSALG
LPMVSVLGPASERRAPSQQARRGRGEEGENEVTGGVLNLSTGGSHDPLSWVVIPPGTVVL
KPAVVN
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccctggacgagcccctggacctgaagctccctcgaagggctaatgggcgggac
agaggggcgcgctcaccccccctatctccactgcaccccaagcgagctcgccagcttcgc
atggcagacgatggcaccgcagtcattgagcccgcctcgccagcatctccacacacaggt
atgcaggtggtccctcatgaccgaacagaaactcccaccccccctgcagtggacctgagc
ttgtctccctcctctcgccacacccccagctctccggaaatgaccaatggcaactatgtc
cactcaggaaattctcacatctcacaggcctttcagttctttgtgccaatcggagctggg
gcaggacttcacctgccatcctctatgttccttgcccaaacgagtgagaagagggcctct
cctgacctctcagcagatgaacaactggcctgccactggaagaagtgccatctgctcttt
gactccctccaagacttggtagatcatgtcaatgacttccatgtcaagcctgagaaggat
tctggttactgctgccactgggagggctgcgctcgcaaagggagggggttcaatgctagg
tacaagatgctcatccatatccgcactcacactaatgagaagccccaccgctgtcccaca
tgcaacaagagcttctcacggctggagaacctcaaaatacacaaccgctcacacacaggt
gaaaagccctacatttgtccatatgagggttgcaacaagcgttactccaactcaagtgac
cgtttcaagcatacacgcacacactatgtcgacaagccctactactgcaagatggtgggc
tgcctgaagcgctacacagaccccagctctcttcgcaagcatatcaaggcccatggtcac
tttgtggctcaggagcatggctccccaggtggggtgggctccatgctgaaggggagtcaa
agcggagtgcttgctagtggaggggggaaggattcggagttatcctatgtgagtggagcc
cacattatcatcccaggggcagcggctgctctcctgggaagccatgctctgcagggcctg
ggtggctccctgcccttgtccccgcttagtcctcgacccctggacctcagcacactgggt
tgccccaactcccctccaggcagcttgggaggcacatccatcctgtccttcaatggctcc
acgctgggcctaaccaagtcccctctgctctccccagcgttcccttcctcggccctgggt
ctgccaatggtgtctgtgctagggcctgcgtctgagcgcagggcccccagtcagcaggcc
aggaggggccggggggaggaaggtgagaatgaggtgactgggggggtcctgaacctttcc
acaggggggtctcatgatcccctgtcctgggtggtcatccccccaggcactgtggtgctc
aagccagctgtggttaactga
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