Scomber scombrus (Atlantic mackerel): 133998944
Help
Entry
133998944 CDS
T10651
Name
(RefSeq) junction plakoglobin-like
KO
K10056
junction plakoglobin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04382
Cornified envelope formation
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133998944
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133998944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133998944
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133998944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
Adaptin_N
HEAT_2
ARMC9_ARM
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
133998944
NCBI-ProteinID:
XP_062293986
LinkDB
All DBs
Position
18:complement(28174698..28336638)
Genome browser
AA seq
752 aa
AA seq
DB search
MMSMQMSEADSVVKVAEWQQTYYASDSGIQSGATTVQDDESNTEYSGSKKYTGSTTANTT
TVPATATSGGGGETAAGGLESPTDLDSQYSLTRAQRVRAAMFPETLVEGEAAMPIQSDPS
QQSNVQRLAEPSQLLKTAIVHLINYQDDAELATRALPELTKLLADEDPVVVNKAAMIVNQ
LTRKEASRRVLVQSPAMVGAVVRAMTTAVDIETARCAASVLHSLSHQREGLLAIFKSGGI
PALVRMLSSPVESVLFYAITTLHNLLLHQEGAKMAVRLADGLQRMVPLLKKSNPKFLAIT
TDCLQLLSYGNQESKLIILANGGPEGLVFITRNYNYEKLLWTTSRVLKVLSVCPSNKPAI
VEAGGMQALGQHLTGSSQRLIQNCLWTLRNLSDAATKQEGLDGLLQILVTQLGSDDVNML
TCATGILSNLTCNNSRNKTLVTQYGGVEALIHAVLRAGEKEDVAEPAVCALRHLTSRHQD
AELAQNAVRLHYGIPAVVKLLGQPHYWPVVKATVGLIRNLALCPANQAPLREAGAIPRLV
NLLLKAHQDTQRHASSAQQTYQDGVRMEEIVEGCTGALHILARDPINRGEIASMQTIPLF
VQLLYSYVENVKRVSAGVLCELALDKQSAELIDAEGASAPLMELLHSNNEGIATYAAAVL
FRISEDKSSDYRKRVSVELTHSLFKHDPAAWEMAHTAVPLEPTYLADELDGSYPPYGYAD
LPLDTLPLDPDLHEPYIPNMTYDPRQAYPEPL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccatgcaaatgagtgaggcggatagtgtggtgaaagtggcggagtggcagcag
acctactatgcctcagactctggaatccaatcaggagccaccacagtgcaggatgatgag
agcaacactgagtacagtggtagtaagaagtacactggcagtactacagctaatactacc
actgttcctgctactgccacttctgggggaggaggagaaacagcggctggtggactagag
agccccacagatttagattctcagtactcactgacccgggctcagcgtgtcagggccgcc
atgttcccagagaccctggtggagggcgaggcggccatgcccattcaatcagatccctcg
cagcagagcaacgttcaacgactggctgagccttcccagttgctaaagacagccatcgtc
cacctgataaactatcaggacgatgctgagctggccaccagagcgttgccagagctcacc
aagcttcttgctgatgaggatccggttgtggtgaacaaagcagccatgatagtcaaccag
ctgacccgaaaagaggccagtcgccgggtgctggtgcagtctccagccatggtgggcgct
gtggtgcgtgccatgacgacagcagttgacatagagacagctcgctgtgcagccagtgtg
ctccacagcctgtcgcaccagagggagggtctgctggccatattcaagtctggagggata
ccagcgctggtccgcatgctgagttcgccagtggaatcagttttattttatgctatcacc
accctccacaacctgttgctgcaccaagagggagccaagatggcggtgcgtctcgctgat
ggcctacagaggatggttcccctactgaaaaagagcaaccccaagttcctagccatcact
actgactgtctccagctcctgtcctatggcaaccaggagagcaagctaatcatactagcc
aatgggggcccagagggtctggtgttcatcacgagaaactacaactatgagaagctgctg
tggaccaccagccgtgtgctcaaagtgctgtctgtgtgtcccagcaacaagccagccata
gtagaggctggtggtatgcaggctttgggtcagcacctcacgggttccagtcagcgtttg
atccaaaactgtctgtggacactccgtaacctgtcagatgctgcaaccaaacaggagggg
ttagatggtcttctgcagatactggtaactcagttgggctcagatgatgtcaacatgttg
acctgcgccactggcatcctgtccaacctaacctgtaacaactcacgaaacaagactctg
gtgactcagtatggtggtgtggaggcattgatccatgctgtgcttcgtgctggggaaaag
gaggatgttgctgagccagcggtctgtgccttgcgtcacctcacatcccgccatcaggac
gctgagctggcccagaatgctgtgcggctgcactatggtatccctgcggttgttaaactg
ctgggacagccacactactggcctgtagtaaaggctacagttggcctgatccggaacctt
gcactgtgcccggccaatcaggcaccactgagggaggcaggtgctattccacgtttggtc
aacctgctgctgaaggctcaccaggacacgcaaagacacgcctcctctgctcagcagaca
taccaggatggtgttcgtatggaggaaatagttgaaggctgcacaggggcacttcacatt
ctggccagagaccccataaacagaggagagattgccagcatgcagaccataccactgttt
gtgcagctgctgtactcatatgtggagaatgtgaagcgagtgtcagcgggcgtcctgtgt
gagctggccctggacaaacagtctgccgaactcatcgatgcagagggagcatcagcacca
ctcatggaactactccactccaacaacgagggaattgccacctacgctgcagcagtacta
ttccgaatttcagaagataagagttcagactacaggaagagagtgtcagtggagcttaca
cattcactcttcaaacacgaccctgctgcctgggaaatggctcatactgcagttccattg
gagcccacatatcttgctgatgagttagatggttcttaccccccctatggctatgctgac
ttgcctctggacaccctgccactagaccctgacctccatgagccctacatccccaacatg
acctatgacccaagacaggcttaccctgaaccactctaa
DBGET
integrated database retrieval system
