Scomber scombrus (Atlantic mackerel): 133998979
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Entry
133998979 CDS
T10651
Symbol
cldnk
Name
(RefSeq) claudin k
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecules
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133998979 (cldnk)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133998979 (cldnk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133998979 (cldnk)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133998979 (cldnk)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133998979 (cldnk)
04147 Exosome [BR:
ssco04147
]
133998979 (cldnk)
04515 Cell adhesion molecules [BR:
ssco04515
]
133998979 (cldnk)
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133998979 (cldnk)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133998979 (cldnk)
Exosomal proteins of colorectal cancer cells
133998979 (cldnk)
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
L1 family
133998979 (cldnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
133998979
NCBI-ProteinID:
XP_062294038
LinkDB
All DBs
Position
18:complement(12319905..12322160)
Genome browser
AA seq
215 aa
AA seq
DB search
MATTGMQLLGLIMSIVGWVGGLVVCAMPLWRVTAFIGNNIVTAQIIWEGLWMTCIVQSTG
QIQCKVYDSLLALPSDMQAARGLTVFSILMCGLALALGVLGVKCTKCIGVNSLKARVARI
SGALFAIAGFLYLVPICWTAHSIIRDFYDPHVAAPHKRELGPALYIGWAASALLLIGGSL
LYAGSSPPGMPGSPTFSSGESSPRRAPASQVKGYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacgggcatgcagttgctgggcctaatcatgtccattgtgggctgggtgggt
gggttagtagtctgtgccatgcccctctggcgggtcactgccttcatcggtaacaacata
gtgacagctcagatcatttgggagggcctgtggatgacttgcattgtgcaaagcacaggt
caaatccagtgtaaggtgtatgacagcttgcttgctctgcccagtgacatgcaggctgcc
cggggcctcaccgtgttctctatcctgatgtgtggcctggctctggctctgggggtccta
ggagtcaagtgcactaagtgtattggtgtaaacagcctcaaggcccgtgttgctcgtatt
tctggcgcccttttcgccatcgcaggtttcctctaccttgtgcccatctgctggactgcc
cactccatcatcagggatttctatgacccacatgtggctgctccacacaagcgtgaactt
ggccctgccctctacatcggctgggctgcatcagctttgctccttattgggggatcgctg
ctctatgctgggtcaagtccccctggcatgccaggctctcccacctttagcagtggagag
agcagtcctcgcagggcacctgcctcacaggtcaaaggttatgtctaa
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integrated database retrieval system
