Scomber scombrus (Atlantic mackerel): 133999001
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Entry
133999001 CDS
T10651
Symbol
tubb4bl
Name
(RefSeq) tubulin beta chain isoform X1
KO
K07375
tubulin beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04517
IgSF CAM signaling
ssco04540
Gap junction
ssco04814
Motor proteins
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133999001 (tubb4bl)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133999001 (tubb4bl)
09144 Cellular community - eukaryotes
04540 Gap junction
133999001 (tubb4bl)
09142 Cell motility
04814 Motor proteins
133999001 (tubb4bl)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133999001 (tubb4bl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133999001 (tubb4bl)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133999001 (tubb4bl)
04147 Exosome [BR:
ssco04147
]
133999001 (tubb4bl)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133999001 (tubb4bl)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133999001 (tubb4bl)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133999001 (tubb4bl)
Exosomal proteins of colorectal cancer cells
133999001 (tubb4bl)
Exosomal proteins of bladder cancer cells
133999001 (tubb4bl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
133999001
NCBI-ProteinID:
XP_062294071
LinkDB
All DBs
Position
18:complement(12191618..12194097)
Genome browser
AA seq
447 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGSSGG
KYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL
DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSD
TVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVT
TCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDSK
NMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP
PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
LVSEYQQYQDATAEEGEFEEEGEDEVA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtccatttgcaagccggtcagtgcgggaaccagatcggagctaagttt
tgggaggtgatcagtgatgagcatggcattgatcccactggcacttaccacggggacagt
gatctgcagctagacaggatcagcgtttactacaatgaggccacaggtagttcaggtgga
aaatatgtgccccgagccatcctggtggacctggagccaggtaccatggattcagtcaga
tctggtcccttcgggcagatctttagacccgacaactttgtgtttggccagagtggagct
ggaaacaactgggcaaagggtcactacactgagggagccgagctggtggactccgtcctg
gacgtagtgaggaaagaggctgagagctgcgattgcctgcagggcttccagctcactcac
tccctgggtggtggtactggctctggtatgggcaccctgctcatcagcaaaatccgtgag
gagtaccccgaccgcatcatgaacaccttcagcgtggtgccttcccccaaggtgtccgac
acagttgttgagccctacaacgccaccctctctgtccaccagctggtagaaaacacagat
gaaacctactgcattgacaatgaagctctctatgatatctgcttccgcacactcaaactc
accacccccacttacggagatctcaaccatttagtgtccgccaccatgagcggggtgacc
acctgtctgcgtttccccggccagctcaatgctgatctccgtaaacttgctgtcaacatg
gtgcccttcccacgtctgcacttcttcatgccaggcttcgcccccctcaccagcaggggc
agccagcagtaccgtgccctgtctgtgcctgagctcacccaacagatgtttgactccaag
aacatgatggctgcctgcgacccacgtcatggccgctacctcaccgttgccgcagtgttc
aggggccgcatgtccatgaaggaggtggacgagcagatgttgaatgtgcagaacaagaac
agcagctactttgtcgaatggatccccaacaatgtgaagaccgccgtctgtgacatccca
ccccgtggcctcaaaatggctgctactttcatcggcaatagcacagccatccaggagctg
ttcaagcgcatctccgagcagttcacggccatgttccgccgtaaggctttcctccactgg
tacactggtgagggcatggatgagatggagttcaccgaggccgagagtaacatgaacgac
ctggtgtccgagtaccagcagtaccaggacgccactgctgaggagggtgaatttgaggaa
gagggagaggacgaagtcgcctaa
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