Scomber scombrus (Atlantic mackerel): 133999067
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Entry
133999067 CDS
T10651
Symbol
srsf2b
Name
(RefSeq) serine/arginine-rich splicing factor 2b
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133999067 (srsf2b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133999067 (srsf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133999067 (srsf2b)
Spliceosome [BR:
ssco03041
]
Common components
Common spliceosomal components
SR proteins
133999067 (srsf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_8
RRM_PARP14_3
RRM_5
NSs
HALZ
Abhydrolase_3
Motif
Other DBs
NCBI-GeneID:
133999067
NCBI-ProteinID:
XP_062294177
LinkDB
All DBs
Position
18:2350600..2356279
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AA seq
320 aa
AA seq
DB search
MSRPPPDINDMTSLKVNNLTYRTSPETLRQVFEKYGRVGDVHIPRDPCTRENRGFAFVRF
HYKCDAEEALDGMDGTVLDGRELRVEMAHVDHVEILTSLKVDNLTYRTSPDTLRVMFEMY
GRVGDVHIPRDPYTKESKGFAFVRFHHKRDAEDAIDAMDGVMMDGRELRVQMAHGGGGGG
GGRREGQPRRSGGHDRRNRRSENFTPSCSSRASSVADGHFLDDEAAGPSRLLWNEGRSLQ
FPDRFSPTPKRRKLMDPIGVEDDEKGLHNADITTVQPPRTPKSLVLLESLAVLAAENDIL
REENEELKRQLEKQRQTFFL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcctccgccggacattaacgacatgacttccctcaaagtgaacaacctcacc
taccggacgtctcccgaaacactcaggcaggtgttcgagaagtacggccgtgtaggggac
gtgcacatccccagagacccctgcacgagggagaaccggggctttgcattcgtgcgtttc
cactacaagtgcgacgcagaggaggctttggacgggatggatggcaccgtgctggacgga
cgggagctccgggtggagatggcccacgtcgatcacgtggagattctcacctccctgaaa
gtggacaacctgacctaccgcacatctccagacacgctcagagtgatgtttgagatgtac
ggccgggtaggggacgtgcacatccccagagacccctacaccaaggagagcaaaggcttc
gcgtttgtgcgttttcaccacaagcgggacgcagaggacgcgattgatgcgatggatgga
gtgatgatggacggacgggagctgcgggttcagatggcccatggaggaggaggaggagga
ggaggccggcgggaagggcagccccggaggtctggaggacatgaccgcagaaacaggagg
agtgaaaatttcaccccaagctgcagctccagagcgagcagcgtggctgacggacatttc
ctggacgacgaagccgccggtccgtcgcggttgctctggaacgaggggcggtctctccag
ttccctgaccgcttcagccccacgcctaaacgaaggaaactaatggaccccatcggcgtt
gaggatgacgagaagggtctacacaatgccgacattacaaccgtgcagccgcctcgcact
ccgaagagtctcgtgctgctggaaagtctcgctgtgctcgcagcggagaacgacattctg
agagaggagaatgaggaattgaaaagacaattagagaaacagagacaaacttttttcctt
tag
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