Scomber scombrus (Atlantic mackerel): 133999086
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Entry
133999086 CDS
T10651
Symbol
atp6v0a1a
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a isoform X1
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00190
Oxidative phosphorylation
ssco01100
Metabolic pathways
ssco04142
Lysosome
ssco04145
Phagosome
Module
ssco_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
133999086 (atp6v0a1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133999086 (atp6v0a1a)
04142 Lysosome
133999086 (atp6v0a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133999086 (atp6v0a1a)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133999086 (atp6v0a1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
133999086
NCBI-ProteinID:
XP_062294206
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Position
18:8778623..8792213
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AA seq
850 aa
AA seq
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MGELFRSEEMTLAQLFLQSEAAYCCVSELGEIGMVQFRDLNPDVNVFQRKFVNEVRRCEE
MDRKLRFVEKEIKKANIPIVDTGENPEVPFPRDMIDLEATFEKLENELKEINTNQEALKK
NFLELTELKHILRRTQQFFDEMEDPSLLEESSTLLDPNEINRGAPLRLGFVAGVIGRERI
PTFERMLWRVCRGNVFLRQADIEDPLEDPASGDQVHKSVFIIFFQGDQLKNRVKKICEGF
RATLYPCPETPQERKEMLAGVNARIEDLQMVLNQTEDHRQRVLQAAAKTVRVWFIKVRKM
KAIYHTLNLCNIDVTQKCLIAEVWCPVSDLDSIQFALRRGTEKSGSTVPSILNRMQTKQT
PPTYNKTNKFTSGFQNIVDAYGIGSYREINPAPYTIITFPFLFAVMFGDLGHGTLMTCAA
LYLVLRESRLMAQKNDNEMFSMVFAGRYIILLMGIFSVYTGIIYNDCFSKSLNLFGSGWS
VRPMFDRRVGGNWTDETLEGNKILQLDPAVDGVFTGAYPIGIDPIWNIATNKLTFLNSFK
MKMSIVLGVIHMLFGVSLSLFNHLYFKKPLNIYLGFIPEIIFMSSLFGYLALLIFYKWLS
YDARTSKDAPSLLIAFINMFLFNYSDPTNKPLYRGQMVLQSLLVVIALACVPCMLIVKTL
VLRRQHLWRKNLGTENFGGIRVGNGPTEDEAEIIQHDQLSQHSEEEPERCLLSPAFKARE
EEEFNFSDVAVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWSMVMRIGLSTT
SIGGFFLLTIAFFFFAVLTVAILLIMEGLSAFLHALRLHWVEFQNKFYSGQGFKFLPFTF
ESILDGSFEE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgggggaactcttccgaagcgaagagatgacgctggctcagctcttcctccagtcagaa
gctgcctactgctgcgtcagtgagctgggagagatcgggatggtgcagttccgtgattta
aatcctgacgtgaatgtgttccaacgaaagtttgtcaatgaagtacgacgatgtgaagag
atggatcgcaaactgaggtttgtggagaaagagattaagaaggcgaacatcccgatagtt
gacacgggagagaaccctgaagtccctttcccgagggacatgatcgacttggaggccacc
tttgagaagcttgagaacgagctgaaggaaataaacaccaaccaagaagccctaaagaag
aacttcctggaactgactgagctcaagcacattctgcgccgcacacagcagttttttgat
gagatggaggaccccagtttattggaggagtcatccacccttctggaccccaatgagatt
aatcgaggggctcctctcagactgggatttgtggctggagttatcggaagggaacgtatt
cccacatttgagaggatgttgtggagagtttgcagaggtaatgtgttcctgaggcaggca
gacattgaagatcctctggaggaccccgcttcgggggaccaggtccacaagtccgtcttt
atcattttcttccagggagaccagctgaagaatagagtgaagaagatctgtgaggggttc
agagcaacgttgtacccgtgtccagaaacacctcaggagaggaaagagatgctagcagga
gtgaacgcccgcattgaagacctgcaaatggtgctgaaccagacagaggatcacaggcag
agggtcttgcaggctgcagccaagacagtcagagtgtggttcatcaaggtgaggaagatg
aaggccatctaccacacgctaaacctctgcaacattgatgtgacccagaagtgtctgatt
gccgaggtgtggtgtcctgtctccgacttggactccatccagtttgccctgcgcaggggg
acggagaagagcggctccactgtgccttccatcctcaacaggatgcagacaaagcagacc
ccacccacctataacaagacaaacaagttcacctcaggctttcagaacattgtggatgct
tatggaatcggcagctaccgtgagattaatccagctccatacaccatcatcaccttcccc
ttcctatttgcggttatgtttggtgacctgggccacgggacgctcatgacctgtgctgct
ctatacctcgtgctaagagagagcaggctgatggcccagaagaacgataatgagatgttc
agcatggtgtttgcagggcgctacatcatcctgcttatgggaatcttctcagtttacacg
ggcatcatttacaacgactgtttctctaagtccctcaatctgtttggctcgggctggagc
gtcaggcctatgttcgaccgtcgagtggggggcaactggactgatgaaacactcgaggga
aacaagattttgcagttggacccagcagtagatggagttttcacaggggcttaccctatc
ggcattgatccgatatggaacattgccaccaacaagctgacattcctgaactccttcaaa
atgaagatgtctattgtcctgggagtcatccacatgctgtttggagtctctctcagtctc
ttcaaccacctgtatttcaagaagccactgaatatctacttgggatttatcccagagatt
attttcatgtccagtctgtttggctacctcgcccttctaatcttctataaatggttgtca
tacgatgcaagaacctctaaagatgcgcctagtctcctcatcgccttcatcaacatgttc
ctgtttaactacagtgaccccactaacaaacctctgtacagaggacagatggtcttacaa
tcactcttggtggtcatcgccctggcatgtgttccttgtatgttaatagtgaaaactctg
gttctgcggagacagcatttgtggcggaaaaacttgggcacagaaaactttggagggatt
agggtgggcaacggtcccactgaggatgaggcagaaatcatacagcatgaccagctctca
cagcactctgaggaggagcctgagcgttgccttttgtcacctgctttcaaggcccgggag
gaggaagagtttaacttttcagacgtggccgtgcaccaggccatccacactatagagtac
tgcctgggttgtatctccaacactgcttcctatctgaggctttgggccctcagtctggcg
catgcacagttgtcagaggtgctgtggtccatggtgatgcgcatcggcctttccacaacc
agcattggagggtttttccttctcaccatagcctttttcttctttgctgttctcacagtt
gcaattcttctcattatggaaggtttgtcagccttcctgcatgcactgcgactgcactgg
gtggagttccaaaataagttttactcaggccagggcttcaaattcctccccttcacattc
gaaagcatcctggatgggagttttgaagaatga
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