Scomber scombrus (Atlantic mackerel): 133999096
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Entry
133999096 CDS
T10651
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
133999096
NCBI-ProteinID:
XP_062294230
LinkDB
All DBs
Position
18:complement(5829778..5895653)
Genome browser
AA seq
2447 aa
AA seq
DB search
MTMPFSPLSSDDEQQRMLGNNRHLYPGAEDEEEEEEEEEEEMEEDDRDEDGEEENGELEG
EEEEDEEEMVEEVRRGGGLSRGGRGEGHRQSGKLAGRPTGDRQIRSGNPGHTTNPYSSNP
GPTHQQPANQIQQQQQRRLKERSASSVPSEDAHIAMMVFRIGIPDIKQTKCLRFNPDATV
WKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLREYPQSFEKGVPYLEFRY
KTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMTKFLDKGLDPNFQDPDTGETP
LSLAVQCEPGGGESIRVLAEGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDY
KDRRGLTPLYHTVLTGGDTSCCETLLYHHAKLGIRDENGWDETHQACQNGNSQHLEHLLF
YGADSSSQNASGNTALHICALYNKESCARILLYRGANKDTKNNSGQTPFQVAVMSGHFEL
GEIIKNHRDTDVVPFVESPKYAPQRRESARTLAIPHPHPFLRANSDSSMNLPEWMAVPNA
PTTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPAPATTTVQT
AGQRRRLYSAVPGRVFVATRSHSAQGEREISFNKGDRVKVLSVGEGGYWEGTVRGRTGWF
PSDCVEEVMLRSQENRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSE
GFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVK
VGHRQVVNMIRQGGNSLMVKVVMVTRNPDMEEGSRKKIPQQSKRLSTPAIALRSKSMTSE
LEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNEAPGTRPQ
GPKRDRGRSFYGNEPNYGDQSGMGMMGLGFERGQYTSGHAPHHGMLRQKSIGVPEEERQH
LHPPAMKFARSLSVPGPDDIPPPPTTAPPEPPFSSAPPLGWRAKSSQQPSVSVSQSTSTS
AHYQPYSQAVHFTHGGRERAGGPSTGPGGGAADHATSYTHATAHTAQSRTASRKVAYTGE
PVGAGIGAGGGAKAAGLRRGYSTAVPPSSIATVMPQQQQTTQSQPQRADRSAAGGGAGGP
KGGARRGKGPLVKQSKVEDLRAGQGTLGGKGAVEKSSIPIPTIIVKAPSTSSSGRSSQGS
SVEADAPASGETDDTKTPHGPPPSTPAPQPPAPPSIPAPPPPSLPSIRAQENLDFTSQFG
AAIVGAARRDRERFHEARRKSASLFMSAEDEVGLGIVSDGVGGVTRTQLSQQQLSTQAES
SSTRLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSPALDYQPKSVPTDLYTAAGRQ
QPASSTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGTDHHFTRQMSSVVFPSS
AVTSQPVSSATQTSSSSYLVTSSSLAATTATVGRPPSPRILRGVGSGWGEDGSGGERERE
GGGAREGLRVRFSEDKTVHTHHYQSQPYQPSYKERERERSRERERELSRERERDKEREAA
AESAAQQAAQSQQPRRPSFLRMESQAEAYILSLTPPSPPPTGTQQTTSTTGTTGSGLMVL
PPPAPSVDVDDEFVYADPLPPPLEFANSFDRGISGYSQRGMHPNMTARQQQVPPPPPPPP
PPPPPPPPPQKEPFVSGFPAHTPLPSPQAGDSTASSLTSYDSEVANLTQSAPSPSQTSPN
PLPPSSPSTLQPTSIGGPPPPPSVSPPPPPGSYHRPFSMSHPHHLYNSTHTPGRSSPTPP
PHTVAPPPAYRGPPAHSSAATSAPHRGTASITTTSSCATTTTAAAITTSTSTQLYHERTH
ATHTVSSSNITSSRRTGDHHRHPPAAKKGESQETVVDSGIEELDSRSSSDHHLDSILALS
GARGDRLDRGERGGVGGRMAGGGGTGESERGGDFLESYMSYLDGQTFEMQNATAGTSTYP
KSNRFREGGRISELHRQTSTAPPSYHSHRRRDEQEEEDVVEEGVAEDEGGHDGYGVRDIQ
NLGRPSSPYFDRPRTPEMKPLWGEGQMSGEGGQFGTLLEGKKIYPPASSMKPSIINELSS
KLQQRTKDTWSSQRPLGRHRHRFSEDSASALSPPSARSQSPSPISLSQPSLSPSPTPAAQ
YPNWGRSPSPQPTAVPQPPRSHSPLSPTTYSPYPTSPKHRPVYRTKALEFQFIPSRESRK
AESHILQRRRAPSPLISPSERPKLGPPRPSSLPLLPTTPLYSALYDLRGSITPPSPGNPL
GDPYFSPSPPLFAPSGAPPPPNSTLVVSRSLSPTHFLSGTSSPPLHPLPPPTCLSYPHLP
PPSPTKPFASKPLPYWTKWDVADWLGYLNLGEHRERFLDNEIDGSHLPSLTKDDYLDLGV
TRVGHRMNIERALRTVMDRLSSSPFPISVLSPREGQTDRRRDDGSRS
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccattcagccccctgtccagcgacgacgagcaacaaaggatgctgggaaac
aatcgacatctctacccaggggcggaggacgaggaggaggaagaggaagaggaggaggag
gaaatggaagaagacgaccgcgatgaggacggggaggaggagaatggcgagctggagggg
gaagaggaagaggacgaggaggagatggtggaggaggtcaggcgaggaggaggcctgtct
cgagggggaaggggtgagggacacaggcagtcaggtaaactggctgggcgacccaccggg
gacagacagatccggtcagggaaccctgggcacaccacaaacccctattcatccaacccg
gggcccacgcaccaacagccagccaatcagatacagcagcagcagcagaggaggctgaag
gagcgcagcgccagctcggtgccatctgaggacgcccacatcgccatgatggtgtttcgc
atcggcatcccggacataaagcaaacgaaatgtttgcgttttaacccggacgcgacggtg
tggaaggccaagcagcaggtgctgtgctccctgaccgaatctctccgggacgtcctgaac
tacggtctattccagcccgctactgacggccacgacgctaagttcctggaggaggagagg
ctgctcagagagtacccacagtcctttgagaaaggggtgccatatttggagtttcgatat
aagaccagggtgtacaaacagaccaatctggatgagaagcaactggccaaactgcacacg
aaggccagcctgaaaaaattcatggattatatccaaaccagcgctgtggacaagatgacc
aagttcttagacaagggcctcgatcccaacttccaggaccctgataccggcgagactcct
ctgtccctggcggtgcagtgtgagccaggtggaggtgagtccatccgggtcctggcagag
ggaggggctcatattgacttccgcgccaaagatggactcacaccgctacacaaggctgtt
cgaggccaccgccatacagccctgctggtcttgctgtctctgggcgcctctccagactac
aaggaccggcgagggctgacaccgctctaccacactgtgctgacagggggcgacacctcc
tgctgcgaaacactgctttaccaccacgccaagctgggcatcagggacgagaacggctgg
gacgagacacatcaggcctgtcagaacggtaactcgcagcatctggagcacctcctcttc
tatggggcagattcttcctcccagaacgcctctggaaacactgccttgcacatctgtgct
ttatacaacaaggaaagctgtgcacgaattctgctctaccggggagcaaataaagacaca
aaaaataacagtgggcagaccccctttcaggtggctgtaatgtctggccattttgagctg
ggcgaaataatcaaaaatcaccgggatacagatgttgttcccttcgttgagtctccaaaa
tatgcccctcagaggcgggagagcgcccggacgctggcaataccccaccctcatcccttc
ctccgggccaacagtgacagcagcatgaacctgccggagtggatggcggtgcccaacgct
ccgaccaccaacatcgtatcagtgcagggatataagcatacaggtactctgcggagctcc
agcagtcccagaggggcgaggacgcgctccccgtcccgagggaggatcggagacaaggag
gaccgcagcaggcagagccggagacaggggccggcccctgccaccactactgtacaaact
gccgggcagcggagacgcctctacagtgccgtcccaggacgagtctttgtagctactcga
tctcactctgcccagggcgagagagaaatcagtttcaataagggagacagggtcaaagtg
ttgagtgtcggcgagggcggctactgggagggaacggtcagaggtcgcacaggctggttc
ccctctgactgtgtggaggaagtgatgcttcgaagccaagagaaccgatcagagagccgt
ggagaaagagccaaaaggctgtttcgccattacactgtgggatcctacgacagctttgac
gctcccagtgactatataatcaaggagaagacagtgctcctgcagaaaaaagacagcgag
ggtttcggctttgtgctgagaggggccaaagctcagactcccatcgaggagtttactccc
accccagccttccctgccctgcagtacctggagtcagtggacgagggaggagtggcgtgg
agagccggtctcaggatgggggatttcctgatagaggtcaatggtcagaacgtggtgaag
gttggtcaccggcaggttgtcaacatgatccggcaaggtggtaacagtctcatggtaaag
gttgtcatggtaacccgcaaccctgacatggaggagggttccagaaagaaaatcccccag
cagagtaagaggctgagcactccggctatcgccctacgatccaaatccatgacttcagag
ctggaggagatggtggagcgagctgctaccccttggaaaaaaaaatcagaattcgaatcc
tcccaagttacagagaagaagaggacagtctatcagatggctttgaataaactagatgaa
attcttgcagcagctcagcagacaatcagcaccaatgaggcgccggggacacggccacag
gggccaaagagagacaggggacgaagtttctatggcaatgagccaaactacggggatcag
tccgggatggggatgatgggtctcggctttgagcgtggccagtacacctcaggtcacgcc
cctcatcacggtatgctgcggcagaaatccatcggggtgcctgaggaggagaggcagcac
ctgcatcctccagccatgaagtttgcccgcagtctgtcggtgcccggcccagacgacatc
ccccctcctcccaccactgctccaccagaacctccattctcctctgcacctccgctaggt
tggagagctaagtcgtctcagcagccctctgtgtccgtgtcccagtccacgtccacctct
gcgcactaccagccctactcccaggcagtgcacttcacccatggcggcagggagagggca
ggtggtcccagcaccggtcccggtggcggagcggcggaccacgcgacctcgtatactcac
gcaactgcacacactgctcaaagcaggactgcttcgcggaaggttgcttatactggggag
cctgttggagctggcattggggcaggtggaggggccaaggcagcgggtcttagaagaggc
tacagtaccgccgtcccaccgtccagcattgccactgtaatgccccagcaacaacagact
acccagagtcaaccccaacgagcagaccgcagtgcagctgggggtggagcagggggtcct
aaaggtggggctcggagaggtaagggccccctggtgaagcaatcgaaggtagaggacctg
cgcgcgggccagggtacattagggggcaaaggcgcagtggagaaaagctccatccccatc
cccactattattgtcaaggctccttcaaccagcagcagtggacgcagtagccagggcagc
agcgtggaggccgatgcaccagcatcaggggagacagacgataccaaaacaccccacggt
cctcctccctccactcctgctccgcagccccctgctccaccttccatcccagcaccgcca
cctccctccttgccttctattcgagcccaggaaaacctggactttaccagccagtttggg
gctgccatcgttggtgcagctcgaagagacagggagcggtttcacgaagctcgcagaaag
agtgcttccttgttcatgtctgctgaggacgaagtgggtcttgggatagtgagcgacgga
gtaggaggggtgacaaggactcagttgtcacagcagcagcttagcacacaggctgagagt
tcatcaacgcggttgcgaccgtccaagtctattgacgagggcatgttctctggggacacc
tttatccaccacacccgtagtatgcctcccgcctttggcttacctgaatattcatcacct
gccctagactatcagcccaagtctgtgcctactgacttgtacacagcagcaggtaggcaa
cagccagcctccagcaccaccttcattcaccctctaacaggaaaggctcttgacccaacg
tcgcctctcggccttgccctggctgcccgagagcgtgctctgagagatgacagcaggtta
aggaggggaacagatcaccatttcacccgccagatgtcgagtgtggtgtttccttcatct
gctgtcacctctcagccagtgtcgtctgctacacagacctccagctcctcctacctggtc
acatcctcttctctggctgccaccacggccactgttggccgcccaccctcgcccagaatc
ctaagaggagttgggagtgggtggggtgaggatggtagtggaggagagagggagcgggaa
ggaggaggggctcgcgaggggcttagagttcgcttttctgaggacaaaactgtccacacg
caccactaccagtctcagccatatcagccgtcctacaaggagagggagcgggagaggtcg
agggaacgggagagggagctgtcgagggaaagagagagggataaagagagagaggcggcc
gccgagagcgctgctcagcaggcggcccagtctcagcagcctcggagaccctcttttctc
aggatggaaagtcaagctgaagcctatatcttgtccctcacacctccttctcctccacct
accggtactcagcagaccacaagcactactgggaccactgggtctggcctgatggttctt
cctcctcctgccccctcagtcgatgtggatgatgagtttgtctatgcggaccccctccca
cctccactggagtttgctaatagctttgacagaggaatatcagggtactcacaacgtggg
atgcaccccaacatgaccgcccgccaacagcaggtcccacctcctccacctcctcctccc
ccaccaccaccacctcctccacccccccaaaaagaaccatttgtaagcgggtttcctgct
catacgccccttccctcaccgcaggcaggggactccactgcctcaagtctcacatcttac
gacagtgaagtggctaacctgactcagtccgctccttccccctcccagacgtcgcccaac
cctcttcctccctcctcaccctccactttgcaacccacatctataggtggacctccacct
cccccgtcagtctcaccgccacctcctcccggctcctaccacagacccttctctatgtcc
catccccaccacctttataacagcactcacactcctgggcgctcctcccctactcctcct
ccgcacactgtcgcaccaccaccggcctaccgtggcccaccggcgcactcctctgctgcc
acctccgctccacacaggggcaccgcctccatcaccacgacctctagctgtgccactaca
accaccgctgctgccatcacaacgagcacctccactcagctctaccacgagcgaacacac
gcaacacatacagtttcctccagcaacatcactagtagtcgcaggacaggagaccaccac
cgtcatccccctgctgccaagaaaggagagtcccaggagacggtggtggactctgggatc
gaagaactggacagccgcagcagcagcgaccaccacctggacagcatcctggctcttagt
ggagctcggggagacaggctggaccgaggggagagaggcggggttggtgggcggatggca
gggggaggtgggacaggggaatcagaaaggggaggagattttctggagtcttacatgagc
tacctggatggacaaacttttgagatgcagaacgccacagcaggaacctccacctaccca
aaatccaacaggtttagagagggaggtcgcatcagcgagctacacagacagaccagcaca
gctcctccatcctaccactcccacagacgaagagatgagcaggaagaggaggatgtggtt
gaggaaggtgtggcagaggatgaaggtggccacgatgggtacggggtgagggacatacag
aatttgggacgtccgagttcgccgtactttgatcgcccacgcactcctgagatgaagcct
ctttggggcgaggggcagatgagcggtgaaggaggccagttcgggacacttttagaggga
aagaagatttaccctcctgcatctagtatgaagcccagcatcataaatgagctgagcagc
aaactgcagcaaagaaccaaggacacctggagcagccagagaccactgggcagacacagg
cacagattttcagaagactcagcctcagctctgagccccccatcagctcgatcccagtcg
ccgtctccaatctcgttatcgcagccatcgttgtccccatccccaaccccggccgcccag
taccccaactgggggaggtccccatctcctcagcctacagcagtccctcaacctccacgt
tcacattccccgctgtcaccaacaacttattccccttaccccacctcccccaaacacaga
cctgtctaccggaccaaagccctggaattccaattcatccccagtcgtgagtcccgtaaa
gcagagtcacacatcctccagcgtaggcgagcacccagccccctcatctccccatcagag
aggcccaagctgggcccaccacgcccatcatcccttccgctcctccccaccacaccccta
tacagcgccctctacgacctccgaggttcaatcactccaccatcacccgggaaccctctc
ggagatccttacttctcgccctctccacccctttttgccccctcgggtgcacctcctcct
ccaaactccactttagttgtttctcgatcactctctccgactcacttcttatccgggacg
tcttctccacccttgcaccctctccctccacctacatgcctgagctacccccatctacca
ccaccgtcccctactaagccttttgcctccaagccgctaccctactggaccaagtgggac
gttgcagactggctaggatacctgaacctgggtgagcacagagagcgtttcctggacaac
gagattgacggcagtcatctgccctcccttaccaaggacgactatctggatttgggtgtg
actcgtgtgggccatcgtatgaatatagaacgagccctgaggacagtaatggacaggctg
tccagcagcccgttccccatttctgttctctcacctcgggaaggacagaccgacaggagg
agggacgacgggagccggagctga
DBGET
integrated database retrieval system
