Scomber scombrus (Atlantic mackerel): 133999159
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Entry
133999159 CDS
T10651
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133999159
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Gene cluster
GFIT
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NCBI-GeneID:
133999159
NCBI-ProteinID:
XP_062294325
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Position
2:36732510..36801356
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AA seq
1248 aa
AA seq
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MDQCEDREEGVPPSKSSLCGEHDSQTKAQSIRMQQQRADSPEPSCVSMKSDRSMGHPMTF
KDGQLADGRMQQQREDSPEPSCVSMKSDGSMGHPINFKDGQPADGRVQQQSSEVPSDQSA
QQHQTQLDSIFMLLEENIVTFVKNELKRVQRGLSPDDPECLESQSEDEEVLDGEEEEQRR
SNREAFLKITVHFLRRMKQEELAERLQSRLFPLVYREQMLNSNLQKKFQCLFEGIAKAGN
PTLLNQIYTPLYITEGGTAEVNDEHEIRQIETASRKPDRPETTIRQEDIFKASPGRDEPI
RTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIHFTFPFTFRELNVLKEKKYSLVELVHH
FFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGK
LLPSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRFRDEEQASTIISHIK
TSRSLHIMCHIPVFCWITATVLEDVLKSREGGELPKTLTEMYIHFLVVQSKLKNIKYDGG
AETDPHCNKKSRKMIESLGKLAFEQLQKGNLIFYESDLTECGIDITAASVYSGMFTQVFK
EERGLYQDKVFCFVHLSLQEFLAALHVHLTFIKSGVNLLEEEQTTSRLSKVMKNKPTRFY
QSAVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSSSQKNLKTVEYIKKKIS
KNLSAERSINLFHCLNELNDRSLVEEIQQYLRSGSLSTDKLSPAQWSALVFILLSSEEDL
DVFDLKKYSASEEALLRLLPVVKASNKALLSGCLITEEGCASLASALSSNPSHLRELDLS
YNHPGDSGEKLLSAGLKDPHWRLDTLRLSDCNLSERSCAALSSVLSSQSSSLRDLDLSNN
NLQDSGVKQLSAGLESPHCGLETLRLSGCNLSERSCAALSSVLSSQSSSLRDLNLSHNDL
QDSGVKQLSDGLKSPHCGLETLGLSGCLITEEGCASLASALSSNPSHLKELDLSYNHPGD
SGEKLLSAGLKDPHWRLDTLRMDHGGLQRLKPGLRKYACELELDPNTMNRNLKLSDNNRK
VTHVEEDQSYPDHPDRFDHWHQLLCRNVLTGRCYWEVEWRGIVYISVSYRRIRRKGNSDD
CGFGLNDQSWSLRSSAGRYSVWHNKRQTSISSSSSSSSSSVSNRVAVYVDCPAGTLSFYR
VSSDTLIHLHTFNTTFTEPLCAGFTVWSGSVSLCLCRRESLSDRNSGN
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccctccctctaaaagctctctgtgtggg
gaacatgacagccagaccaaagctcagagtatcaggatgcagcagcagagagcagactct
cctgaacccagctgtgtgtccatgaagagtgatcggtctatgggtcatcctatgacattt
aaagatggacaacttgctgatggaaggatgcagcagcagagagaagactctcctgaaccc
agctgtgtgtccatgaagagtgacgggtctatgggtcatcctattaattttaaagatgga
caacctgctgatggaagagttcagcagcagagctcagaggttcccagtgatcagtctgca
cagcagcatcaaacacagctggactccatatttatgctgctggaggagaacatcgtcact
tttgtgaagaatgagctgaagagagtccagaggggtctgagtccagatgacccagaatgc
ttagagagtcagagtgaggatgaggaggtgttggacggtgaggaggaagagcagaggagg
agcaacagagaggcatttctgaagatcacagtgcacttcctgaggagaatgaagcaggag
gagctggctgagcgtctgcagagcaggttgttcccattagtatacagggagcagatgtta
aattctaacctgcagaagaagttccagtgtctgtttgaggggatcgctaaagcaggaaac
ccaacccttctgaatcagatctacacaccgctctacatcacagagggagggactgcagag
gtcaatgatgaacatgagatcagacagattgaaacagcatccaggaaaccagacagacca
gaaacaacaatcagacaagaagacatctttaaagcctcacctggaagagatgaaccaatc
agaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttc
actctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattcact
ttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatcat
ttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttc
atctttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctg
actgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcagggggaaa
ctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccct
cctgagtgtgttggcatggtgacagaggtcagagggttcactgacccacagaaggaggag
tacttcaggaagagattcagagatgaggagcaggccagcaccatcatctcccacatcaag
acatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctaca
gttctggaggatgtgttgaaaagcagagagggaggagagctgcccaagaccctgactgag
atgtacatccacttcctggtggttcagtccaaactgaagaacatcaagtatgatggagga
gctgagacagatccacactgcaataaaaagagcaggaagatgattgagtctctgggaaaa
ctggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgacagag
tgtggcatcgatatcacagcagcctcagtgtactcaggaatgttcacacaggtctttaaa
gaggagagagggctgtaccaggacaaggtgttctgcttcgtccatctgagccttcaggag
tttctggctgctcttcatgtccatctgacattcatcaagtctggagttaatctgctggaa
gaagaacaaacaacatccaggttgtctaaagtgatgaaaaacaaaccaacacgtttctac
cagagtgctgtggacgaagccttaaagagtccaaatggacacctggacttgttcctccgc
ttcctcctgggtctttcactgcagaccaatcagactctcctacgaggtctgctgacacag
acaggaagtagctcacagaaaaatctgaaaacagtcgagtacatcaagaagaagatcagt
aagaatctgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgat
cgttctctagtggaggagatccaacagtacctgagatcaggaagtctctccacagataaa
ctgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaagaagatctg
gacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgcca
gtggtcaaagcctccaacaaagctcttctgtcaggatgtctgatcacagaggaaggctgt
gcttctctggcctcagctctaagctccaacccctcccatctgagagagctggacctgagc
tacaatcatccaggagactcaggagagaagcttctgtctgctggactgaaggatccacac
tggagactggacactctcaggttgagtgactgtaacctctccgagagaagctgtgcagct
ctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaac
aacctacaggattcaggagtgaagcagctttctgctggactggagagtccacactgtgga
ctggaaactctcaggttgagtggctgtaacctctcagagagaagctgtgcagctctgtcc
tcagttctcagctcccagtcctctagtctgagagatctgaacctgagtcacaacgacctg
caggattcaggagtgaagcagctttctgatggactgaagagtccacactgtggactggaa
actctcggtctgtcaggatgtctgatcacagaggaaggctgtgcttctctggcctcagct
ctgagctccaacccctcccatctgaaagagctggacctgagctacaatcatccaggagac
tcaggagagaagcttctgtctgctggactgaaggatccacactggagactggacactctc
aggatggaccatggtggactgcagagactgaaacctggtctgaggaagtatgcctgtgaa
ctggaactggatccaaacacaatgaacagaaacctcaaactgtctgataacaacaggaag
gtgacgcatgtggaggaggatcagtcatatcctgatcatccagacagatttgatcactgg
catcagctgctgtgtagaaatgttctgactggtcgctgttactgggaggtcgagtggaga
ggaatagtttatatatcagtgagttacagaagaatcagaaggaaaggaaacagtgatgac
tgtgggtttggattgaatgatcagtcctggagtctgagaagctctgctggtcgttactct
gtctggcacaataagagacaaacatccatctcctcctcctcctcctcctcctcctcctct
gtctctaacagagtagcagtgtatgtggactgtcctgctggcactctgtccttctacaga
gtctcctctgacacactgatccacctccacaccttcaacaccacattcactgaacctctg
tgtgctgggtttacagtctggtctggttcagtctctctgtgtctctgtaggagggagagt
ctctcagacagaaactctggtaactga
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