Scomber scombrus (Atlantic mackerel): 133999179
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Entry
133999179 CDS
T10651
Symbol
ifnphi1
Name
(RefSeq) interferon phi 1
KO
K05414
interferon alpha
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04060
Cytokine-cytokine receptor interaction
ssco04217
Necroptosis
ssco04620
Toll-like receptor signaling pathway
ssco04621
NOD-like receptor signaling pathway
ssco04622
RIG-I-like receptor signaling pathway
ssco04623
Cytosolic DNA-sensing pathway
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
133999179 (ifnphi1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
133999179 (ifnphi1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133999179 (ifnphi1)
04621 NOD-like receptor signaling pathway
133999179 (ifnphi1)
04622 RIG-I-like receptor signaling pathway
133999179 (ifnphi1)
04623 Cytosolic DNA-sensing pathway
133999179 (ifnphi1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133999179 (ifnphi1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
133999179 (ifnphi1)
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Interferons
133999179 (ifnphi1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Orthoreo_P10
Motif
Other DBs
NCBI-GeneID:
133999179
NCBI-ProteinID:
XP_062294348
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All DBs
Position
18:267106..275979
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AA seq
257 aa
AA seq
DB search
MAASITQSGQTAAGWTLRDTLLFITFITFITETETVFIIFIIFIILMYTVLFLLCGALTP
ALCCDWFNHQFRHLNGESLKLLQQMGDQLTEAEDSPVAFSYRLYERMRNTQVEESQLRFI
RDSLQLIFDLYRHGNHSSVTWDTDKSERFLIQTHRQIEELNQCFSTERHVSVKLRKYYKR
LSKSTVERMGGSAASWELIRQETAHHLEQLDLLVASMASRRRSRRPSAVSVTTSRRRSAA
SVSSRRRSAASVSSRSR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagtattacccaatcagggcagactgcagcaggctggacactcagagacact
ctcctcttcatcaccttcatcaccttcatcacagagaccgagactgtcttcatcatcttc
atcatcttcatcatcctcatgtacaccgtgctcttcctcctctgtggcgctctgacgccg
gctctctgctgtgattggttcaatcatcagtttcgtcaccttaacggcgaatcactgaag
ctgctgcagcagatgggcgatcagctgacggaggcggaggacagtcccgttgctttctcc
tacagactctatgaacgcatgaggaacactcaggtggaggagtcccagctgcgtttcatc
agagacagtctgcagcttatttttgacctctatcgccacggcaaccactcctccgttacc
tgggataccgacaagagcgagcgcttcctgattcagacgcacagacagatagaggagctc
aaccaatgtttttctactgaaagacacgtcagcgtcaagctgagaaagtactacaagaga
ctcagcaagagcactgtggagcgcatggggggcagtgctgcatcctgggagctaatcagg
caggaaactgcacatcacctggagcagttggacctgctggttgcctccatggccagcagg
aggcgcagcaggaggccctctgcagtctccgtcaccaccagcaggaggcgctctgcagcc
tccgtctccagcaggaggcgctctgcagcctccgtctccagcaggagccgctaa
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integrated database retrieval system
