Scomber scombrus (Atlantic mackerel): 133999203
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Entry
133999203 CDS
T10651
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133999203
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Motif
Pfam:
MACPF
EGF_PRF1
C2
TMEM171
Motif
Other DBs
NCBI-GeneID:
133999203
NCBI-ProteinID:
XP_062294375
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Position
18:6042069..6046356
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AA seq
596 aa
AA seq
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MHREQTRRGLNHQFASINQININMFVLNVCVCVGLVLSLPQCTYQSCTEGRPKDCLEADF
APGSNLAGEGFDITKMERKGAYVLDMKLWKRTKDKTCTLCTNPYLENKKQKLPLSVVDWR
TKQSCNAKVATSVHRSSESLVSSSTSKIDNDWKASLEVNVGEKGGSFMLAGSNSKLAEYS
MEKTKNDKYSFTTQSMSCEFYSYRVSKTPKLHREFRKAVKELPKIYSLEYKQRFYKLIDD
FGTHYITKVKLGGDVQSVTSIRQCQASLQGLSVDEVQMCLEVEASASIKATASTQAKHCK
NDIDKTESKSSFSSTFNDRFTQITGGHTTEPDLLFSSDKNPSAYKEWLTTLPLNPDIISY
SLDSLHELLPVKNPARKNLRTAISHYILEKGLLRNCSNRCQAGIKTDSRDPCVCQCHNNP
GVTPDCCPARRGMARVIITVKRATGLWGDHTTATDGYVKVFFNKRMVQRTRVIYNNNNPH
WATVVDLSTESLSEAPAVRFEVWDEDNKWDDDLLGGCQRPVSAGVKEDLCNLQHGQLVYK
VEVTCAPSLSGRLCMDYIPSPMSPSLQKLYVSRHAHRIPKAMLLKMGVFVNETSPT
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtgaacagacaagacgagggttaaaccatcagtttgcatctatcaatcaaatt
aacatcaacatgtttgtgttgaatgtttgtgtctgtgtcggcctcgtgctgtccctgcct
cagtgtacgtatcagtcatgcacagaggggagacccaaagattgcctagaagcagatttt
gctccaggttccaatttggccggggaaggcttcgatatcacgaaaatggaacgtaaagga
gcctatgtgcttgatatgaaactgtggaaacggacaaaggacaaaacatgcaccctgtgt
accaacccctatctggaaaacaaaaagcaaaagcttcccttgtcagtggtggactggaga
acgaagcagtcctgcaatgctaaagtggcgacctcagtccaccgatccagtgagtctcta
gtcagttccagcacatccaagattgacaacgactggaaggccagtctagaggttaatgtg
ggtgaaaagggcggctcatttatgttggctggcagcaactctaaactggctgaatactcg
atggagaaaacaaagaatgacaagtacagtttcacaacccaaagcatgtcctgtgagttc
tacagctaccgagtgtccaaaactcccaagttgcacagagaatttcgcaaagcggtgaaa
gaactccccaaaatctacagtctcgagtacaagcaacggttttataaactgattgacgac
tttggcacccactacatcaccaaggtgaaattgggaggagatgttcaatctgtgaccagt
atcaggcagtgccaggccagcctgcagggcctcagtgttgatgaggtgcagatgtgcctg
gaagtggaggcgtccgccagcatcaaagctacagcaagtactcaagcaaaacactgcaag
aatgacattgacaagacggagagtaagtcatccttctccagcaccttcaacgacaggttc
acacaaataacggggggccataccacggagccagaccttctcttctcttctgataaaaat
ccatcagcctacaaggaatggctgaccacattaccactcaatccagacatcatctcatat
tctctggactcactgcacgagttactgcctgtcaaaaaccctgctcgaaagaacctgcga
acagccattagccattacatcctggagaaaggtctgttgagaaactgcagcaaccgctgt
caggccggcatcaagaccgactcgagggatccctgcgtctgccaatgccataataaccct
ggtgtaaccccagactgctgtccggcccgtaggggcatggcacgcgtcatcataactgta
aaaagggccaccggtctttggggcgatcacacaactgccacagacgggtacgtgaaagtg
ttcttcaacaagcggatggtgcagcgtactcgagtcatttacaacaacaacaacccccac
tgggccacggtcgtcgacctaagtaccgagagtttgtcagaggcacctgcagtgagattt
gaagtttgggacgaggacaacaagtgggacgacgacctcctgggaggatgtcagcgacct
gtatctgctggagtgaaggaggatctctgcaatctgcagcacggccagcttgtctacaaa
gtggaggtgacgtgtgctccgagtctgagcggaaggttatgcatggactatataccttcg
cctatgagtccaagtctgcagaagctgtatgtgtcccgtcacgcccaccgtattccaaag
gccatgctgttaaagatgggggtttttgtgaatgaaactagtcccacatag
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