Scomber scombrus (Atlantic mackerel): 133999246
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Entry
133999246 CDS
T10651
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133999246 (vps54)
Membrane trafficking [BR:
ssco04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
133999246 (vps54)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133999246
NCBI-ProteinID:
XP_062294422
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Position
2:complement(34170910..34206803)
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AA seq
974 aa
AA seq
DB search
MASSHSSSPVPRPSGRGRAGIYHKERDASPNRCRPVRSLPDVCPKEPTGEGRALCDGPSV
VAEHDRWTVFSSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFYLPNITREHF
GPYLQEMAQRERIHERCKTICPNKDDVDAVSSITTNHDKSRAELEQVPKIFMKPEFALED
PATFNAVLPWSHFNSAGGKSSRDVASSKLLQEKLSHYLDVVEVSIARQISLRSEAFFHAM
SSQHELQDRLQETQRAVSVLRGRTAAIDRVMCQGPLRALRTALTRNNCVKLHNKLKLMAA
VHQTQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGSQLCELEKLIDKMMV
EDFSMYARSDLNRSLKDEPQVLEKVHNAVSLKERLASLVFGLLRQRKLDFLDIYSDEMIM
AAKLIVSQCVAENVLHIEEIDTEVVTKLADQMRLMTFPQWFQLLTSVFESFLLFLQRIKA
TLNVIKNVVLEIQDSNQKMRLLEEAASEPAGQESCQSLQLLQGEAELAYLTHEGLFISDA
LSEAQQQQVQDQSSAAGTRTQQNRTEPESTSREQNFMSAENMMPSDQELNRVLNNIQELL
FTASDVSHDRCVKVLTARAKDGSLERLSSAEFVCLSQAVDGFIRDTEELCGRRSVSLRGA
LQSQANRFVHRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVNSIADGRITLPERKTTGP
DDKKPAEFLLVNGQKYAVVGTVLLLIRIFLEYCQCVSDIPAIATDMLTRLSDLLKHFNSR
SCQLVLGAGALQVVGLKTITTKNLALASRCLQLVVLYIPVIRAHFETKLQPKQFSVLRHF
DHITKDYNDHISEISAKLVAIMDSLFEKVLSKYEVKAPMPSACFRNVCKQMAKMHEAINE
LLPEDQTQRLFLRINASFKMHLKRQLARLGVVNDGGPQNGLVVVDVAFYTENVQVLKSLE
RLELNMAEIWEQKR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagccacagctcctccccagtgcctcgtcccagcggtcgaggccgagctggg
atttatcacaaggagcgagacgcctccccgaatcgctgccggccggttcgctcgctgccc
gacgtttgccccaaagagccgaccggtgagggtcgggctctgtgtgacggaccgtcggtg
gttgcggagcacgacagatggacggtcttcagctctaaggtgaatcttcccgccgcgctc
aacgacccgcgactcgccaaacgggaatctgactttttcaccaaaacatgggggctggac
ttcgcagagacggaggtgatgccctcgttctacctccccaacatcaccagggaacacttc
gggccgtacctgcaggagatggctcagagggaaagaattcatgaacgctgtaagacgatc
tgtcccaacaaagacgacgtggacgccgtttccagtatcaccaccaaccacgataaatcc
agagctgagctggaacaagtcccgaagatcttcatgaagcctgagtttgctctggaggat
ccggctacgttcaacgctgtgcttccctggtcgcacttcaacagcgccggagggaagagc
agcagagacgtggcttcgtccaaactgctgcaggagaagctgagtcactacctggacgtg
gtggaggtgagcatcgctcggcagatctctcttcgctccgaggcgttttttcacgccatg
tcgtctcagcacgagctgcaggaccgtctgcaggagacgcagcgagccgtgtccgtgctg
cgcggccgcactgccgccatcgaccgggtcatgtgccaggggcctctgagggccctccgc
accgccctgacgcgcaacaactgcgtgaagctgcacaacaagctgaagctgatggcggcg
gtgcatcagacgcagccgacggtgcagctgctgctctccacctccgagttcgtaggagcg
ctagaactcatcgctacgaccaaggaggtgctgcagcaggagctgcaggggatccacagc
ttcagacatctgggctctcagctgtgtgagctggagaagctgatcgataagatgatggtt
gaagacttcagcatgtacgctcgcagcgacctgaaccgcagcctgaaggacgagccgcag
gtcctcgagaaggttcacaacgctgtctcactgaaggagcgtctggcctcgctggtgttc
ggcctgctgcggcagaggaagctggactttctggatatttacagcgatgagatgatcatg
gccgccaaactgatcgtctctcagtgtgtggcagaaaatgttttgcacatagaagaaatc
gacactgaagtcgtcactaagctagccgaccagatgcgtctgatgactttccctcagtgg
ttccagctgctgacgagcgtcttcgagagtttccttctgttcctgcagaggatcaaggcg
actctgaacgtgatcaagaacgtggttctggagattcaggactcgaaccagaagatgcgt
ctgctggaggaagccgcttcagagcctgcaggtcaggagtcctgtcagagtctgcagctg
ctgcagggggaggcggagctggcctacctcacccacgagggtctgttcatcagcgacgct
ctgagcgaagcccagcagcagcaggtccaggatcagagctctgcagcaggaaccaggacc
cagcagaaccgaacagaaccagagtctacaagcagggagcaaaacttcatgtcggctgag
aacatgatgccttctgatcaggagctgaaccgggtgctgaacaacatccaggagctgctg
ttcaccgcctccgacgttagccacgaccgctgcgtcaaagtgctcacagccagagccaag
gacggctctctggagcgtctgagctcggcggagtttgtgtgtctctcgcaggcggtggac
ggtttcatcagggacacggaggagctgtgcggccggcgcagcgtctccctgaggggggcg
ctgcagagccaagccaaccgcttcgtccatcgcttccacgaagagcgcaaaaccaaactc
agtcttctactggataacgagcgctggaagcaggccgaggttcctgctgagtttcaggat
ctggtgaactccatcgctgacggcaggataacactaccagagcgcaaaactacaggtcca
gacgacaagaagccggccgagttcctgcttgttaacgggcagaaatacgccgtcgtcggg
acggttctgctgctgatccggatcttcctggaatactgtcagtgtgtgagcgacatccca
gccatcgccaccgacatgctcacgcgtctgtcggacctcctcaagcacttcaactctcgg
agctgccagctggttctgggagccggagctctgcaggtcgtcggcctgaagaccatcacc
accaaaaaccttgcgttagcgtcgcgctgcctgcagctggtggttctctacattcccgtc
atcagagctcattttgagaccaaactgcagccgaaacagttcagcgtcctcaggcacttc
gaccacatcaccaaggactacaacgatcacatatcagagatctcagctaaactggtcgcc
atcatggacagtctgttcgagaaggttttatcaaagtacgaggtgaaagctccgatgccg
tcggcctgcttcagaaacgtctgtaagcagatggcgaagatgcacgaagccatcaacgaa
cttttacctgaagaccagactcagaggttgtttctgaggatcaacgccagctttaaaatg
catctgaagcggcagctggctcgactcggcgtggtcaacgacggaggaccgcagaacggg
ttggtggtcgtggacgttgcgttctacacggagaacgttcaggtgctgaagagcctcgag
cggctcgaactcaacatggccgaaatctgggagcagaagaggtga
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