Scomber scombrus (Atlantic mackerel): 133999257
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Entry
133999257 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-11-like
KO
K10352
myosin heavy chain 9/10/11/14
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03273
Virion - Lassa virus and SFTS virus
ssco04270
Vascular smooth muscle contraction
ssco04530
Tight junction
ssco04810
Regulation of actin cytoskeleton
ssco04814
Motor proteins
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
133999257
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133999257
09142 Cell motility
04814 Motor proteins
133999257
04820 Cytoskeleton in muscle cells
133999257
04810 Regulation of actin cytoskeleton
133999257
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
133999257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133999257
04147 Exosome [BR:
ssco04147
]
133999257
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
133999257
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
133999257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_tail_1
Myosin_N
AAA_22
NPHP3_N
AAA_6
Motif
Other DBs
NCBI-GeneID:
133999257
NCBI-ProteinID:
XP_062294430
LinkDB
All DBs
Position
18:3080900..3109187
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AA seq
1167 aa
AA seq
DB search
MADPADDSKFLYLDNDFRNSSVAQADWAAKKLVWVPSERDGFEQANIKEEKGDEVLVELS
NGQKMKVNKDEIQKMNPPKFSKVEDMAALTFLNEASVLHNLRERYFSSLIYTYSGLFCVV
VNPYKMLPIYSEKIIEMYKGKKRHEVPPHIYSITDNAYRNMMQDREDQSILCTGESGAGK
TENTKKVIQYLAVIASSHKGKKEANPQQQGGNLAYGELEKQLLQANPILEAFGNAKTIKN
DNSSRFGKFIKLNFDVTGYIVGATIDTYLLEKSRCIRQGNTERAFHIFYYMVAGAKDKMR
EELLLEDFSSYRFLVAGHVEVRGGPGQEEDEMLEETLEAMTIMGFTEEERIGMFKVVSTV
LQLGNIKFEKERNNEQATMPDNTAAQKVCHLQGINVTDFTRAILTPRIKVGREVVQKAQT
KQQADFAVEALAKAMYERLFRWILARVNKTLDKSKRQSSSFLGILDIAGFEIFEDNSFEQ
LCINYTNERLQQLFNHTMFVLEQEEYKREGIEWNFIDFGLDLQPCIELIERPNNPPGILA
LLDEECWFPKATDLTFVDKLLNTHTGHVKFTKPKQHKDKLMFSVLHYAGKVDYNAANWLT
KNMDPLNDNVTALLNNSSNNFIQDLWKDADRVVGLDTMNKMSESSVPTKSKKGMFRTVGQ
LYKESLGKLMTTLHNTQPNFVRCIIPNHEKRAGKMDSNLVLEQLRCNGVLEGIRICRQGY
PNRIVFQEFRQRYEILAANAIPKGFMDGKQACSLMVKHLDLDPNLFRIGQSKMFFRTGVL
AQLEEERDLKLTVVIISFQAQARGFLGRNTTLSTQSQVKEVQRDLEESRAAQKEVLTXSQ
ESERRAKAMEADVVQLHEMLAAAERARKQAEAERDELSEEMASNSSGRTLMSDEKRRLDS
KISQLEEELEEEQANVESLNDRLRKSQQLVEQLSSDLSTEKFSSQSREGSRQQLERQNRE
LKAKLQEAEGQGRTKLKSAIAGLEAKLREAEEQLEIESRERQANGKNLRQKEKKLKDFTV
QMEDERKQAQQYKDQAEKSSLRVKQLKLQLEEAEEEAQRMAAGRRKLQRELDESSEGNEA
LNREVSSLRSKLRRGGEAGFSSPSPRSSGSIRSLGLGGGGGGSISRRSAIRENSVELQEE
EPRSPSPPTCDSPAEPRGEVYTCSPDE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccgccgacgacagcaagttcctttacctggataacgacttccgcaacagc
agcgtggcgcaggccgactgggccgccaagaagctggtgtgggtgccgtcggagcgggac
ggcttcgagcaggccaacatcaaagaggagaagggtgatgaggtgctcgtggagctttcc
aacggtcagaagatgaaagtgaacaaggacgagatccagaagatgaacccgcccaagttc
agcaaggtggaagacatggcggccctcaccttcctcaacgaagcctccgtcctgcacaac
ctgcgagagagatacttctccagcctgatctatacgtactcgggtctgttctgcgtggtg
gtgaatccctacaagatgctgccaatctactctgaaaagataatagagatgtataaaggc
aagaagcgtcacgaggtgccgccgcacatctactccatcacagacaacgcctacaggaac
atgatgcaagaccgtgaggatcagtctattctctgcacaggtgagtctggagcaggaaag
acagaaaacaccaagaaggtgattcagtacctggccgtcatcgcttcttcacacaaaggc
aaaaaggaagcaaaccctcagcagcagggaggaaatctggcttatggggagctagagaag
cagctgctgcaggccaatcccatcctggaggctttcggtaacgccaaaaccatcaagaac
gacaactcctcccgatttggaaagttcatcaagctcaactttgacgtgaccggctacatc
gtcggggccactattgacacctacctgctggagaagtctcgctgtatccgtcagggcaac
accgagcgagcctttcacatcttctattacatggtggccggagccaaagacaagatgagg
gaggagctgctgctggaggacttcagcagctatcgtttcctggttgcgggacatgtggag
gtccgtggaggtcccggtcaggaggaggacgagatgttagaagagactctggaggccatg
acgatcatgggcttcactgaggaagagagaataggcatgtttaaggtggtgtccactgtc
ctccagctgggcaacatcaagtttgagaaggagaggaacaacgagcaggcgaccatgcct
gacaacaccgctgcccagaaggtgtgtcacctgcagggcatcaacgtgaccgacttcacc
cgggccatcctcacccccaggatcaaagtgggccgggaggtggtgcagaaggcgcagacc
aagcagcaggctgattttgcggtggaggctctggctaaggccatgtacgaacgtctgttt
cgttggatcctcgccagagtcaacaagacgctggacaagagcaagaggcagtcgtcgtcc
ttcttgggcatcctggacatcgctggctttgagatttttgaggacaactcattcgagcag
ctctgcatcaactacaccaacgagcgtctgcagcagctcttcaaccacaccatgttcgtc
ctggagcaggaggagtacaagagggagggcatcgagtggaacttcatcgacttcggcctg
gatctgcagccctgcatcgagctcatcgagaggccgaacaaccctccaggcatcctggcc
ctgctggacgaggagtgctggttccccaaagccactgatcttaccttcgtggacaagctg
ctgaacactcacaccggtcacgttaagttcactaaacccaaacagcacaaagacaagctg
atgttcagtgttctgcactacgctggaaaggtggactataatgcagcaaactggttgacg
aagaacatggaccctctgaacgacaacgtgacagctctgctcaacaactcatccaacaac
ttcatccaggacctgtggaaagacgcggatcgagtggtgggtctggataccatgaacaag
atgtcagagagttcggtccccactaaatccaagaagggtatgttccgtacagtcggccag
ctgtacaaggagtctctgggcaagctgatgaccacgctgcacaacacgcaaccaaacttt
gtccgctgtatcatccccaaccacgagaagagggctggtaagatggactccaacttggtg
ctggagcagctccggtgcaacggtgtgctggagggcatccgaatctgtcggcagggatac
ccgaaccgcatcgtgttccaggagttcaggcagagatatgagatcctggctgctaacgcc
atcccgaaaggcttcatggacgggaagcaggcgtgcagtctgatggtaaagcatctggat
ctggatcctaacctgtttcgtattggtcagagtaagatgttcttcaggaccggcgttctg
gctcagctggaggaggagagagacctcaaactgacggtggtcatcatctccttccaggct
caagcaagaggcttcctgggccgcaataccacgctgtccacacagagccaggtgaaggag
gtgcagagggacctggaggagtcacgtgcagcccagaaggaggtgctgaccntcagccag
gagtctgagcgcagagccaaggcgatggaggccgacgtcgtccagctgcatgagatgttg
gcagcagccgagagagctcgtaagcaggcggaggcggagagagacgagctgtccgaagaa
atggccagtaactcctccggaaggaccctgatgtctgatgagaagcgtcggctggactct
aagatcagccagctggaggaggagctggaggaggagcaggccaacgtggagagcctcaac
gaccgtctgaggaagagccagcagctggtggagcagctgagttcggacctgtccacagag
aaattctcctctcagagccgggagggatccaggcagcagctggagagacagaatcgagag
ctgaaggccaaactgcaggaggcggagggccagggccgcaccaagctcaagtccgccatc
gccggcctggaggccaaactgagagaggcggaggagcagctggagatcgagagcagagag
cgtcaagccaacggcaagaacctgcgtcagaaagagaagaaactgaaggatttcaccgtc
cagatggaggatgagaggaagcaggcgcagcagtacaaagaccaggcggagaagagcagc
ctgcgggtgaagcagctgaagcttcagctggaggaggcggaggaggaggcgcagcgcatg
gcggccggccgcaggaaactgcagagagagctggacgagtcgagcgagggcaacgaagct
ctcaacagagaagtgtcttcactcaggagcaaactgaggcgtggcggggaggcgggtttc
agcagtcccagtccgaggagcagcggcagcatcaggagtttggggctcggaggaggagga
ggaggaagcatcagccggaggagcgccatcagagagaactcagtggagctccaggaggaa
gagcctcgctccccgtctccaccaacctgcgactcccctgcggagccacgcggagaagtc
tacacctgctcccccgacgagtag
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