Scomber scombrus (Atlantic mackerel): 133999263
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Entry
133999263 CDS
T10651
Symbol
tbc1d17
Name
(RefSeq) TBC1 domain family member 17
KO
K19945
TBC1 domain family member 17
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133999263 (tbc1d17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133999263 (tbc1d17)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133999263 (tbc1d17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
133999263
NCBI-ProteinID:
XP_062294434
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All DBs
Position
18:complement(5506957..5520480)
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AA seq
636 aa
AA seq
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MEQNAQDYKLIFEKEGVYLHTNAKRSNQDTIPGFIRIVERAGLPALEWSPLEDEGRCAPA
VLYAKKDGEGGEEVTNFDPGYEPDWAVISTVKKDREHVPVKDSDQWSFSLPLSELYSLRR
ARWSLGRNFLVLTSRGGHPLPPLHFHRGGTRELLRSLQRYIILDQSPVDGRLFLAYPHDS
GALSQSFDKLQLLDDGGSDLVSRFIQDPYATTFGGFSKVTNFFRAAIRPPDSPFHLRTGQ
DPSLPSQADDEPGFELITCGVELGPRPNVMRGPPLDKWDVFLDPEGRVKDPEKIKDLVFR
GGIKPSLRKEAWKFLLGFYPWNSTAKEREAILQVKTDEYFRMKVQWKSVSEEQEMRNSLL
RGYRSLIERDVSRTDRHNTFFSGNDNPGLTLLHDVLMTYCMYNFDLGYVQGMSDLLAPLL
FVTQNEVESFWCLTGFMDLLHQNFEESQEAMKQQLLQLSILLKALDPELCDFLDSQDSGS
LCFCFRWLLIWFKREFSFEDILILWEVLWTRRPCDNFHLLIACSILQSQRGELIGSDHDF
NTILKHINELTMRLDLQTVLRGAEAIYLQLVQCKELPLKVLEVLGLYVPSSSEEESPDSQ
VSETQRLLSQPEAGAASSRAAGAAGAAGGPPAPTYP
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacgcgcaagattacaagctaatatttgagaaggaaggggtgtacctgcac
acaaatgccaagaggagcaaccaggacaccatcccagggttcatccggattgtggagcgg
gctgggttgccagctttagaatggagtccgctggaggatgaaggccgctgtgcccctgct
gtactttacgccaaaaaggatggagagggaggggaggaggttacaaactttgaccctggg
tacgagccagactgggctgttatcagcacggtgaagaaagatcgggaacacgtccccgtc
aaagattcagatcagtggtcgttctcgctgcctctctcagagctgtactctctccggagg
gcccggtggtccttgggtcgaaacttcctggtgttgactagtagaggaggccaccctctg
cctcctctgcacttccacagaggaggaaccagagagctgctgaggtccctgcaacgttac
atcatcctggaccagtcaccggttgacgggcgtctcttcctcgcctacccacatgactcc
ggcgctctgtctcagtccttcgacaagttgcagctgctcgacgatggaggctctgatctc
gtctcgagatttatccaagacccctatgccactacgtttggtggattctccaaagtcaca
aatttcttcagggcagctattcggcctccggattccccgttccacctacgtactggtcag
gatcctagtttgccctcccaggctgatgacgagcctggctttgagctcataacctgtggt
gtggagctcggccccagaccaaatgtaatgagggggccacctctggataaatgggacgtg
ttcttggaccctgaggggcgagtgaaggacccagagaagattaaagaccttgtgttcaga
gggggtatcaaaccatcgctaagaaaggaggcctggaagttcctcctgggcttttatccg
tggaacagcaccgccaaagaaagagaagcgattctgcaggtcaaaacggacgaatacttc
agaatgaaggtgcagtggaagtcggtgagcgaagagcaggagatgaggaactccctcctc
agaggataccgcagcctgatagaaagagacgtcagcaggacggacagacacaacacgttc
ttctctgggaacgacaacccaggactgactctgctccacgatgtgctgatgacgtactgc
atgtacaactttgatctcggttatgtgcaggggatgagtgacctcctggcccctctgctg
ttcgtcacccagaacgaagtggagtccttctggtgtctgacaggcttcatggacctgttg
caccagaactttgaagagtctcaggaggcgatgaagcagcagctccttcagctcagtatc
ctgctgaaggctctggacccggagctatgtgacttcctggactctcaggacagcggctct
ctgtgcttctgtttccgctggctgctcatctggtttaagagagagttttccttcgaggac
atcctcattctgtgggaggttctctggactcgtcgaccatgtgacaacttccacctgctg
atcgcctgctccatcctccagtcccagagaggagagctgatcggctcagaccacgacttc
aatactatactgaaacacattaatgaactgaccatgaggttggacctgcagactgtccta
cgtggagcagaagccatctacctgcagctggttcagtgtaaggagcttcccctgaaggtg
ctggaggttctgggtctctacgtcccgtccagctccgaggaggagagtccggactcgcag
gtcagcgagacgcagcgactcctcagccaaccggaggcaggagctgcttcgtctagagca
gcaggagcagcaggagcagcaggtggtcctcctgcccccacctatccttaa
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