Scomber scombrus (Atlantic mackerel): 133999305
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Entry
133999305 CDS
T10651
Symbol
grin2ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04020
Calcium signaling pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133999305 (grin2ba)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133999305 (grin2ba)
04082 Neuroactive ligand signaling
133999305 (grin2ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133999305 (grin2ba)
Ion channels [BR:
ssco04040
]
Ligand-gated channels
Glutamate (ionotropic)
133999305 (grin2ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Med3
Motif
Other DBs
NCBI-GeneID:
133999305
NCBI-ProteinID:
XP_062294480
LinkDB
All DBs
Position
18:21230034..21317422
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AA seq
1572 aa
AA seq
DB search
MNETDPKSIIKSICDLMTEHWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSM
IMAAKDDDSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVTKIRSTIEN
SFVGWELEEVLLLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEANTIFEVAHSVGITGY
GYTWIVPSLIAGDTDVVPAEFPTGLLSVSYDEWDYGLEARVRDGVAIITMATSTMMMDRG
PHTLLKSECHGAPDKKTPISALHLYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKDRQW
DRVGKWENGSLSMKYHVWPRFELYGGAANREDDHLSIVTLEEAPFVIVEDVDPLSGTCMR
NTVPCRKQIKTLNQTKDSGIYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKIN
GTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFL
EPFSADVWVMMFVMLLLVSAIAVFIFEYVSPVGYNRCLADGREPHGPSFTIGKAIWLLWG
LVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKF
QSPNDFSPPFRFGTVPNGSTERNIRNNYPEMHGYMTKFHQRNVNDALQSLKAGKLDAFIY
DAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKESIWKRHVDLAILQLFGDGEMEE
LESLWLTGICHHEKNEVMSSQLDVDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFM
GVCSGQPGFVFSISRGIYSCIHGVQIEEKSSSALNSPSATMNNTHSNIMRLLRTAKNMAS
LSGVNGSPHSALDFIRRESSVYDISEHRRSLAGHSDCKPPYMPEDNMFSDYISEVERTFG
NIHLKDSNLYQDHYMHHHGSTLGLSGPPPNRPHSLGSASSLEGGMFDCDSIGGGVAPIFT
TQPCSALTHRNMSKFDLLSGQTPPSGQGFKGGLPDLYGKFSFKGGASSSTFIPGHGYCGG
RGDDDGNIRSDVSDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIELGYR
RKPYHISHHHYHGHRSSSPPLFPAERKRGGGGGGGNNDGNSYLFREKESVRDFYLDQFRP
KEGVPQWEHVDLTEGPGNREGVVGTCTTLVPVDDFLKSKPKKSDSKSGGGSGLAGGEWEC
RNCRASGGGGGKQMSMHGGGGVGGYGGGMSCGSSGGGGNSRPSSATCMRCEGCKKTGNLY
DISEDNNHLLEQMGGGKGGGGGGGMVAGPQSQSQAQQRRKSGGFGKPLRRQHSYDAFVDL
QKEESGGMGSLMGGLGGIGGMSTAGVGGMLPPPRSVSLKEKERYVEGTSPFAHIFERHGG
SERERERDRDPLFYGGEGRKGPGSPFGLFRGGDGLHRRSIGERDMRERDRSLMEGGGAGF
SLSKSLYPDRVNQNPFIPTFGDDQCLMHGAKQYYMKKQQQQQQQQQQQQQQQQQHVAKNS
RSDFRGQMSTTSYLPASATAGVMSNVAPRFPKELSLGGMNHHGSMLGVGPPRPFNGSNGH
VYEKLSSIESDV
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagacggaccctaaaagcatcatcaagagcatctgcgaccttatgacggagcac
tggctgcagggtgtggtgttcggggatgacaccgaccaggaggccatcgcccagatcctg
gacttcatttcagcccagactcatatccccatcctcggagtccgcgggggctcctccatg
atcatggctgctaaggatgacgactccatgttctttcagtttggcccctccatcgagcag
caggcctctgtcatgctgaacatcatggaggaatacgactggtacatcttctccatcgtc
actacatactacccgggttatcaggactttgtcaccaagatccgtagcaccatcgagaac
agcttcgtgggctgggaactggaggaagttttactactcgacatgtccgtagatgacgga
gattcaaagatccagaaccagctgaagaagctccagagccctgtcattcttctctactgc
acaaaggaggaggccaacaccatattcgaggtggcccattctgttgggattactggctac
ggctacacatggatagtgccctcgctgatagctggagacactgatgtagtgcctgcagag
ttccccacaggtctgctctctgtgtcctatgacgagtgggactacggcctagaggctcgc
gtccgcgacggcgtggcaattatcacgatggcaacatccaccatgatgatggaccgtggc
ccccacaccctgctgaagtccgagtgccacggagctccagacaagaagacccccatctca
gctttgcatttgtacctgatgaatgtgacgttcgaggggcgtaatctgtcgttcagcgag
gacggataccagatgcaccccaagctggtcatcattctgctcaacaaggacagacagtgg
gacagggtgggtaaatgggagaacggttccctatccatgaagtaccatgtgtggcctcgc
tttgaactgtatgggggggcagcaaacagggaggatgaccacctgtccattgtgacattg
gaggaggctccattcgtcattgtggaagacgtggatccgcttagtgggacctgtatgagg
aacactgtgccctgccggaaacagatcaaaacacttaatcaaacaaaggattcagggatc
tacatcaagcgttgctgtaagggtttctgtatcgacatcctgaagaagattgccaagacg
gtcaagttcacgtacgacctatacctggttactaacggcaaacacggcaagaagatcaat
ggaacatggaatggcatggtgggagaggtggtgttgaaaaacgcccacatggccgttggc
tccttgaccatcaatgaggagaggtcagaggtcatcgacttttctgtccccttcatcgag
acgggcatcagtgtcatggtctcccgtagcaacggcactgtttcgccctcggccttctta
gagcccttcagtgcagatgtgtgggtgatgatgttcgtgatgctgttgctggtgtcagca
atagctgtgtttatattcgagtacgtcagccctgtgggctacaaccgctgtctggctgac
ggcagagagcctcatggtccatctttcaccatcggtaaggccatctggctcttgtggggt
ctggtcttcaacaactctgtgccagtgcagaaccccaaaggcaccaccagtaagatcatg
gtgtcagtgtgggccttctttgctgtcatctttctggcctcctacactgccaacttggct
gctttcatgatccaggaggaatacgtggaccaagtaactggtctctcagacaaaaagttc
cagagtcccaacgacttctcgcctccgtttcggttcggcactgtcccaaacgggagtaca
gaaagaaacataaggaataactatccagagatgcacggctacatgacaaagttccatcag
agaaacgtcaacgacgctctgcagagtctcaaggctggcaaactagacgctttcatttat
gatgcggccgtactgaactacatggctggcagggacgagggctgcaagctggtgaccatt
ggcagcggctacatctttgccaccactgggtacggcatcgccatccagaaggagtctatc
tggaagagacatgtggacctggccatcttgcagctctttggagacggtgaaatggaggag
ctagagtccctgtggctgacaggaatctgccaccacgagaaaaatgaagtgatgtccagc
cagctggatgtggacaacatggcgggtgtcttctacatgctcggagccgccatggctctg
tcactcatcaccttcatctgcgagcactggttctactggcagctgcgcttctgcttcatg
ggggtctgctccggccaacccggcttcgtcttctccatcagcaggggcatctacagctgt
atccacggggtgcagattgaagagaaaagcagctcagcattgaactccccatcagccacc
atgaacaacacccattccaacatcatgcgcctcttacgcaccgccaagaacatggcctcc
ctgtcaggggtgaacggctcaccgcacagcgctctggacttcatccgccgcgaatcctcc
gtttatgacatctccgaacatcggcgcagcttggcgggccactcggactgcaagccaccg
tacatgccagaagacaacatgttcagcgactacatcagtgaggtggagaggacgtttggc
aacatccacctgaaggacagtaatctgtaccaggaccactacatgcaccatcacggctca
acactagggctcagcggaccccctcccaacaggccccatagtttgggcagcgctagttct
ctggagggcggcatgttcgactgtgacagcataggtggaggggtggcccctattttcacc
acccagccctgctcagcactgacccacaggaacatgagcaaatttgacctgctgtctgga
cagactcctccctcgggtcagggcttcaagggaggcctgcctgacctgtacgggaagttt
tctttcaagggaggtgcctcaagttccaccttcattcctgggcacggttactgtggaggg
agaggagatgacgatgggaacatacggtcagatgtctctgacatttccacgcacacagta
acttacgggaacctggagggtaacgccaagaagcgcaaacaataccgtgatagcctgaaa
aagaggccggcctctgccaagtccagacgggagctggacgagatcgagctaggctacaga
aggaaaccttaccacatcagccaccaccactaccatggccaccgctcctcctccccgcca
cttttccccgctgaacgcaagcgaggaggaggaggtggaggaggaaacaatgacggtaac
tcctatctcttcagagaaaaggagagtgttagagatttttatttggaccagtttcggccc
aaagagggcgtcccccagtgggaacatgtggacctgacagagggccctgggaatagagaa
ggagtagtggggacctgcaccaccctggttccagtggatgactttctcaagagcaaaccc
aaaaagtcagattcaaagagtgggggaggatctgggctggcagggggagagtgggagtgc
aggaactgtcgggccagtgggggaggaggaggcaaacagatgtccatgcatggaggaggg
ggtgttggcgggtatggtggtggtatgagctgcgggtcctcgggaggcggaggaaacagc
cgacccagctctgcgacctgcatgcgctgcgagggctgtaaaaagacagggaacctctat
gatatcagcgaggataacaaccacctcttggaacagatggggggtgggaaaggtggggga
ggaggtggaggtatggttgcaggccctcagtctcaatctcaggctcagcagaggaggaag
agcggaggattcggcaagccacttaggaggcagcactcgtacgacgcgttcgtcgacctc
cagaaagaggagtcgggcgggatgggaagtttgatggggggtctgggtggaatcggaggg
atgagcaccgcaggtgtaggaggcatgctgcccccacccaggagtgtcagcttgaaggag
aaagaacgctacgtggagggcaccagccccttcgcacacatattcgagcgccacgggggc
tcggagagagaaagggaaagagacagggacccactgttttacggaggtgagggccggaaa
ggacccggctcaccattcggcctgttcagaggtggtgatggcctgcaccgccgctccata
ggtgagagagacatgagagagcgggataggtctttgatggaaggaggcggggcagggttc
tctttatccaaatctctttaccccgaccgggtaaaccaaaacccctttatacccaccttt
ggcgacgaccagtgtctgatgcacggagccaaacaatattacatgaaaaagcaacagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcaacacgttgccaaaaacagc
cgaagtgacttcaggggccagatgagtacgacatcttatctgccagcatccgccacggcc
ggggtaatgtccaatgtggccccccggttcccgaaagagctcagcctcggtggaatgaac
caccacggctccatgctgggggtcggccccccgcgccccttcaatggaagcaatggccat
gtgtacgagaaactctccagcattgagtctgacgtgtga
DBGET
integrated database retrieval system
