Scomber scombrus (Atlantic mackerel): 133999350
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Entry
133999350 CDS
T10651
Symbol
fmnl1a
Name
(RefSeq) formin-like protein 1
KO
K23957
formic-like protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
133999350 (fmnl1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
Drf_FH3
Drf_GBD
FH3_FHOD1-3
FlgK_D1
DUF7217
TnpV
Motif
Other DBs
NCBI-GeneID:
133999350
NCBI-ProteinID:
XP_062294539
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Position
18:9161438..9177567
Genome browser
AA seq
1111 aa
AA seq
DB search
MGNAAAGALEQEPTEGREARNSVGAASGMSDPTPTLQKKQPAPPKLPMPSEEELEERFNM
VLSYMNLPPDKLKLLSQYDNEKKWELVCDQERFQVKSPPSTYLNKIRSFYQDQGGVSRRH
KKRTQEATQVLKDLEISLRTNHIGWAQEFLNEHNKGLDVLVEYLSHAQSDVSFDVESVEN
GVSDRGKPAERSMEDLTKNSGTSHAHGMTRAARALTVRITHTLGSKMHKKSQAFGQRDDV
HVCIMCLRAIMNYQSGFNQVMTHPCCVNEITLSLNSKNPRTKALVLELLAAVCLVRGGHD
IILSAFDSFKEVSKEKNRFEKLMEYFTNDDSNIDFMVASMQFINIVVHSVENMNFRVHLQ
YEFTHLGLDKYLESLKETESEKLQVQIQAYLDNVLDVGALLEDAENRGGVMEHVDELQDH
NSQLSARLQEIENQASEKISELETQLMQATKETELLKESLRESCSQVGALQQREREKELD
REREKDRERLSTSTPQTNSELEQKIQELQEKGLIRLGRSASGALDIQVVPVTVVEYIQAP
ASAAPPSATDSVSDTPSPASSPAASASAPPPPAPPPPPPPGGPDASPPPPPPPPPPPPGI
GAVPPPPPPPPGLGGGPPPPPPPPGAGPPPPPPPPGGGPPPPPGAPNMQSGFKGKKTIQT
KNRMPLLNWQALKPNQVTGTVFNELDDEQILEELNMDIFEEHFKTKAQGNPKDLSTMTKK
VAQKAPTKTSLIDPNKAKNLAITLRKGGLNPSKICTAIEMYDQESLSIDLLELLEPFIPS
DFEKKLLANYEKDGRPLEDLTDEDQFMLRFGKIPRLTQRINTLTFMGNFPDTVKRLQPQL
DSIISASMSIKSSTKLKKILEIVLAFGNYMNSSKRGSAYGFRLQSLDLLLETKSTDRSQT
LLHFITNIILEKYADLANFHTDIHFVDKAALVSLDSILGDIRSLERGMEMTKKEFLVQDD
SPVLKEFIKTNSEKLDSLIKDSKTAQEAYGSVVEYFGENSKTTQPSQFFPIFGRFIKAYK
KAEEEIKQKKKMESEVSEVKDSPSPNKAGAQKGPMMPKMPQMDLIAELKKRQVKPQVREG
KDGALEDIITDLRNSPYRRTDGRRPAQRQET
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggggaatgcggctgcaggtgctttggagcaggaacccactgaaggaagagaggccagg
aactcagttggggcagcttcaggaatgagtgaccccacaccaaccctgcagaagaagcag
ccggctccccccaaactgcccatgccttcagaggaagagttggaagaacgcttcaacatg
gtgctgagctacatgaacctgcccccagataaactgaagctactgagtcagtatgataat
gaaaagaagtgggaactagtctgcgatcaggagcgtttccaggtaaagagtcccccatca
acttacctgaacaagatcaggagcttctaccaggatcaaggaggggtgtctcgcaggcat
aagaaacggacccaagaagccacccaggtccttaaagatttggagatttcccttcgcacc
aatcacattggatgggcacaagagtttctcaatgaacataacaaaggtttggatgtcttg
gtggaatacctgtcccatgcacagagtgacgtctcgtttgatgtggagagtgttgaaaat
ggcgtgtcggacagaggaaagccagctgagaggtcaatggaagacttgaccaagaactcc
ggcacctcccacgcgcatgggatgaccagagctgctcgagcgctgactgtaagaataacc
cacactctggggagcaagatgcataaaaagtcccaggcattcggccagagagatgatgtg
catgtgtgcataatgtgcctgcgagccatcatgaactaccagtctggttttaaccaggtg
atgactcacccatgctgtgtgaatgagatcaccctcagcctcaacagcaagaatcccagg
accaaagcccttgtgttggagttgctggcggctgtctgtcttgtcaggggaggacacgac
atcattctctctgcttttgacagctttaaagaggtgagcaaagaaaagaaccgctttgag
aagttgatggagtacttcaccaatgatgacagcaacattgacttcatggtggcgtccatg
cagttcataaacattgtggtccattcagtggaaaacatgaactttcgtgtccatctacag
tatgagttcactcacctcggactagacaagtatttggagagcctgaaggaaacagagagc
gaaaagctgcaggtccagatccaggcctacctggacaacgtgttagacgtaggagcactg
ctggaggatgctgagaacagaggaggggtgatggagcatgtggacgaactgcaagatcat
aattcacagctgagtgcccggcttcaagaaattgagaatcaggcttcggagaaaatatct
gaactcgagactcagctcatgcaggccaccaaggagactgagctgctcaaagaaagtcta
cgagagtcctgttcccaggttggtgccttacagcaaagagaaagggagaaggagctggac
agggagagggagaaggatagggagcgattgagcacctccaccccacagacaaattcagag
ctcgagcagaagatccaagagctgcaggaaaaggggctgatccgactgggacgcagcgcc
tcaggagctctggacatccaggttgtgcctgtcacagtggttgaatacatccaggcacca
gcctcagccgccccgcccagcgctacggactctgtcagtgatactccctccccagcatct
agccctgctgcctctgcctctgcccctccgccccctgctcctcctccccctccccctcct
ggtggtccagatgcctctcctccaccaccaccacctcctcctccacctccacctggaatt
ggagctgtgccccctcctcctccacctcctcctggtcttggaggaggcccaccacctcct
cctcccccacctggtgctggacctccacctccacctcccccccctgggggtggaccccca
ccccctcctggagcaccaaacatgcaatctgggtttaagggcaagaaaactattcagacc
aagaacaggatgccactgttgaactggcaggctttaaaaccaaaccaggttacaggcacc
gtctttaatgagctggatgatgagcagattttagaggagttgaacatggatatatttgag
gaacactttaagactaaggctcagggtaatcctaaagacctgtccactatgacgaagaag
gttgcccagaaggcccctaccaagacgtccctgattgaccccaacaaggctaagaatctg
gctattactctacgcaaggggggattgaacccatctaaaatctgcaccgctatagagatg
tatgaccaggagtctttgtccatagacctccttgagttgctcgagcccttcataccatca
gactttgagaagaagctgctggctaattacgagaaggatggccgcccgcttgaggatctg
actgacgaagaccaatttatgttacgcttcgggaagattcctcgtctgacccagagaatt
aacactctcactttcatgggcaacttcccggacactgtcaaacgcctgcagccgcaattg
gactctatcatttctgcgtccatgtccatcaagtcttcaaccaaattaaaaaagatctta
gaaattgttctcgcctttggcaactacatgaacagcagtaagaggggctcagcttacggt
tttcgactgcagagtctggaccttctcttggagaccaagtccactgaccgctctcagaca
ctgcttcacttcatcaccaatatcatcctggaaaaatatgccgacttggccaacttccac
actgacatacactttgtggacaaggcagcacttgtgtccctggacagtattcttggagat
atccgctcattagagaggggaatggagatgaccaaaaaggagtttttggtgcaggatgac
agcccagtgttgaaggaattcattaaaaccaacagtgagaagctggattctttgatcaaa
gacagcaagacagcccaggaggcttacggctctgtggtcgagtactttggagagaactca
aaaacaacacagccttcacagtttttcccaatttttggacgcttcataaaggcatataag
aaagcagaggaagagattaagcagaaaaagaaaatggagagtgaggtcagtgaggtaaaa
gactctccatcacccaacaaggccggggcacaaaaggggcctatgatgcccaagatgcct
cagatggatctgatagcagagctgaagaaaaggcaggtgaaaccgcaggtacgcgaggga
aaggacggtgctttggaggacatcatcacagatttgaggaactcgccatacagacggaca
gatggtcgacggccagctcagcgccaggagacttga
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