Scomber scombrus (Atlantic mackerel): 133999355
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Entry
133999355 CDS
T10651
Symbol
hoxb5a
Name
(RefSeq) homeobox protein Hox-B5a
KO
K09305
homeobox protein HoxA/B/C5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133999355 (hoxb5a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
133999355 (hoxb5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
133999355
NCBI-ProteinID:
XP_062294546
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All DBs
Position
18:complement(25945907..25949624)
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AA seq
314 aa
AA seq
DB search
MSSYFVNSFSGRYPNGPDYQLLNYGASSGAMNGGTYRDSSSATMHHATGSYGYSYNGMDL
TVTNRGGGSGGGVNNTGGHFGGGSVVGDSRGFASPAPERSLRQPSSCSLASAADSLLSPA
CGESKLGAQSSSPRSGQPGNGNLSSPNLSSNSSGAGGGGTAQRFTELDDASPEPDELQHN
RDTGNLPTRTGHSQPGQKQEVGPAGSAAGSTAGSDGGTPQIFPWMRKLHISHDMTGPDGK
RARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKDNKL
KSMSLGTGGNVFQP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttactttgtaaactcgttctcggggcgctacccaaatggccccgactatcaa
ctgctaaattatggagccagcagcggcgcaatgaacggcgggacgtacagggactcttcc
tccgccaccatgcaccatgcgacgggctcttacggctacagctacaatggcatggacctg
accgtcaccaaccggggaggggggagcggcggtggcgtcaacaacaccggaggacacttc
gggggaggctcggtggtcggggactcccggggcttcgcttccccggccccggagaggagc
ctcagacaaccatccagctgctccctcgcttccgcggcggattcccttctgtcacccgcg
tgtggagagagtaagttgggcgctcagagctcgtctccccgctcagggcaaccaggaaac
ggcaatctcagctctccaaacctgtcctccaactcctccggcgccggtggcggcggcacg
gcgcaacgcttcacggagttagacgacgcctcgccagagccagacgagttgcagcacaac
cgggatacaggcaacctgcctaccaggaccgggcactcgcagcccgggcagaagcaggag
gtcggcccggcgggatcagccgctggcagcacagcgggcagcgacggtgggacaccacag
atattcccctggatgagaaagctgcacattagccatgatatgacgggcccggatgggaaa
cgggcacggacggcgtacacccgctaccagacgctggagctggagaaagagttccatttc
aaccggtacctcacacggcggcggaggatcgagatcgcgcacacgctctgcctcacggag
aggcagatcaagatctggttccagaaccggaggatgaaatggaagaaggacaacaaactg
aaaagtatgagcctcggcaccggcggcaacgtcttccaaccgtag
DBGET
integrated database retrieval system
