Scomber scombrus (Atlantic mackerel): 133999473
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Entry
133999473 CDS
T10651
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00970
Aminoacyl-tRNA biosynthesis
Brite
Enzymes [BR:
ssco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
133999473 (farsa)
Amino acid related enzymes [BR:
ssco01007
]
Aminoacyl-tRNA synthetase
Class II (U)
133999473 (farsa)
Transfer RNA biogenesis [BR:
ssco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133999473 (farsa)
Prokaryotic type
133999473 (farsa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
MarR_2
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
133999473
NCBI-ProteinID:
XP_062294647
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All DBs
Position
18:22534662..22543838
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AA seq
497 aa
AA seq
DB search
MADTGVVETLLQRIEKADDGVDSVEVAASLGLDHQVVVGAVKSLQALGDMISAELRSSKH
WELTGEGSEIAEQGSHEARVFNSIPLEGLAQSELMKLSFGKIGFSKAMSNKWIRLDKAHE
GGPRIFKAVESIEDQVREKMLLVQKGNFSQLEEKEKNELKKRKLLSEVTVKSYWITKGSS
FSTTVTKQETELTPEMIATGNWKDKTFKPYNFNAMGVAPDCGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPALAHEFPQDYLERVKKVH
SEGGYGSQGYKCDWKLEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGILHEFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEDVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDGPICRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccggtgtggtggagacgcttctacagcggattgagaaggcggacgatggc
gtggacagcgtggaggtggctgccagcctcggcttggaccaccaggtcgtcgtgggagcc
gtgaagagtctgcaggctctcggagacatgatctcagctgagctgcgctcctccaaacac
tgggagctgaccggggagggttcagagatagccgagcagggcagccatgaagcccgggtc
tttaactccatcccgctggagggtctggctcagagtgagctcatgaaactgtcctttggg
aagatcggcttcagcaaggccatgtccaacaagtggatccgattggacaaagcacacgag
ggcggcccgaggatattcaaagctgtggagagcatagaagaccaggttagagagaagatg
cttctggtacagaaaggcaacttctctcaactggaagagaaagaaaagaatgaactgaag
aagagaaagctgctctctgaagtgacggtgaagtcttactggatcactaagggaagctcc
ttcagcaccacggtcaccaaacaggagacggagctcacacccgagatgatcgccacgggt
aactggaaagacaagacatttaaaccatacaactttaacgccatgggtgtggcaccagac
tgtggtcacctgcaccccctgatgaaggtgcggacacagttcagacagatcttcctggag
atgggtttcactgagatgccgaccaacaacttcatagaaagctccttctggaacttcgac
tctctgttccagcctcagcagcacccggccagagaccagcacgacaccttcttcctgtct
gacccagcactcgcccatgagttcccacaggactacctggagagagtgaagaaggtccac
tcagagggaggatatggttcacaagggtacaaatgcgactggaagctggaggaggcgcag
aagaacatcctccgcacacacaccacagcagtcagcgcacgcatgttgtataaactcgcc
caacaggagaagttcacccccgtcaagtacttctccattgaccgggtgttcaggaatgag
accctagatgccacccatctggcagagttccaccagatagagggtgtggtggccgactac
gggctgacactgggggacctcatgggcatcctgcatgagttcttcaccaaactaggaatt
accaaactacgtttcaagcctgcctacaacccatacacagagcccagcatggaggtgttc
agttaccatgaaggactgaaaaagtgggtggaagttggaaactcaggtgtcttccgccca
gagatgctgctgcccatgggtcttcctgaggatgtgtcagtaattgcctggggactgtct
ctggaaaggccaaccatgattaaatacggcatcaacaacatcagagaactggtgggacac
aaggtgaacctacagatggtctacgacggccccatatgtcgactggactcttga
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