Scomber scombrus (Atlantic mackerel): 133999476
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Entry
133999476 CDS
T10651
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133999476
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NCBI-GeneID:
133999476
NCBI-ProteinID:
XP_062294651
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Position
18:25488877..25498530
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AA seq
1092 aa
AA seq
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MMLPQCFNHGQLCIEQGDHQEGPEVATGQSDKEHDEADLASVFMVLEENIITFVRTELKK
FQQVLNPDYTKSLEEHKRDGEVVNGEEEEQRKSSRESLLKITLYILRGMKQGELANILQS
RSAGVCQNKLKGNLKKRFDCLFEGIAKAGNPTPVNKIYTELYITEGGSGEVNDEHEIRLI
ETAFRKSSRPETMIKCEDIFQPLPGRDHQPIRTVMTKGVAGIGKTVLTHKFTLDWAEDKA
NRNIQFMFPFTFRELNLQSGKRYSLVELLHAFFTDTKDAEICNFDKFKVVFIFDGLDECQ
LPLNFHNNEIVTDVTEPTTVDVLLTNLITGKLLPSAHIWITTRPAAAYQIPSECVDMVTE
VRGFTDTQKKEYFRKRFTEEEQASSIISHIKASRSLHIMCHIPVFCWITASVLKVLMGSQ
TIKGLPKTLTEMYIHFLVVQCKVGNVKYRGGAETDPLWNTETCNIIMSLGKLAFEHLQKG
NLIFYESDLIACGIDIRAASVNSGVFTQIFKEECGLHQGKVFCFVHLTFQEFLAALYVVL
TFVNTGVNLLSEPESTSRWVSLKRDKSKVNPLFQSAVDKALQSPNGNLDLFLRFLLGLSL
KTNQTLLQGLLKPPRGSLENYQETVKYIKRKIRKNPSPERCINLFHCLNELNDNSLVEEI
QQYVSSGSLSTDKLSPAQWSALAFILLSSEKDLDVFDLSKYSASEEGLLRLMPVVKASRI
SRLSDCKLSERSCKALACVLMSKSTRLRELDLSNNDLQDSGVKLLTFGLGSPQCKLETLG
LRGCNLSETSCETLASVLSSQSSHLRELDLSDNDLQDSGMKLLSAGLESPQCRLENLRLS
GCQVAEEGCVSLDSALSSNPSHLRELDLSYNYPGYLGVMLLSARLDSPQCRLDTLCVDYG
GRHRLKPFMYACELNLDPNTAHSQLSLSEDNRKVTEMTEVQPYLDHPDRFHHWKQVLCRE
GLSSSCYWEVKWKGWVNVGVTYRGIKRKGDSNECCLGENSRSWGLFCSVHGYSACHNKRT
TGIPARTSSSDSGKVAVYLDWSAGTLSFYRVSAGALIHLHTFHCTFTEPLYPAFRFKLQC
ACESSVSLCKFE
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgatgctacctcaatgcttcaatcatgggcaactctgtattgaacaaggagaccaccag
gaggggccagaggttgccactggtcaatctgacaaggagcatgatgaagcagatctggcc
tccgtatttatggtgctagaagagaacatcatcacttttgtgaggactgagctgaagaaa
ttccagcaagttctaaatccagattacacaaaatccttagaggaacacaaaagggatggg
gaagtggtcaatggtgaggaggaggaacagagaaaaagcagcagagaatcccttctgaag
atcacattgtacattttgaggggaatgaagcagggggaactggctaacatcctgcagagc
agatctgctggagtgtgccaaaataagctcaaaggtaacctaaaaaagaggtttgactgt
ttgtttgaaggaattgctaaagcaggaaacccaacacctgtgaataagatctacacagag
ctctacatcacagagggaggaagtggagaggtcaacgatgaacacgagatcagactgatt
gaaacagcattcaggaaatcatcaaggccagaaactatgatcaaatgtgaagacatcttc
caacccttacctggcagagatcatcaaccaatcagaacggtgatgacaaagggagtggct
ggcattgggaaaacagtcttaacacataagttcaccttggactgggctgaagacaaagcc
aaccgcaacatacagttcatgtttccattcactttcagagagctgaatctgcagagtgga
aaaaggtacagcttggtggaacttcttcatgccttctttactgacaccaaagatgcagaa
atctgcaactttgacaagttcaaggtggtgttcatctttgacggtctggatgagtgtcag
cttcctcttaacttccacaacaatgagatcgtgactgatgttacagagccgaccacagta
gatgtcctgctgaccaacctcatcactgggaaactgcttccttctgctcacatctggata
acgacacgacctgcagcagcctatcagatcccttcagagtgtgttgacatggtgacagag
gtgagagggttcacggacacccaaaagaaagagtacttcaggaagagattcactgaggaa
gagcaggccagcagcatcatctcccacatcaaggcatcacggagccttcacatcatgtgc
cacatcccagtcttctgctggatcaccgcttcagttctgaaggttttaatgggatcacaa
accattaaagggttgccaaagaccctgacagagatgtacatccacttcctggtggttcaa
tgcaaagttgggaatgtcaagtaccgaggaggagctgagacggatccactgtggaacaca
gagacctgcaacatcatcatgtctcttggaaaactggcttttgaacacctgcaaaaaggc
aacttgatcttctatgagtcagacctgatagcgtgtggcattgatatcagagcagcctca
gtgaactcaggagtgttcacacagatctttaaagaggagtgtgggctgcaccagggcaag
gtgttctgctttgtccatctgaccttccaggagtttctggctgctctttatgttgttctg
actttcgtcaacactggtgtcaatctattgtcagaaccggagtcaacatcccgctgggtt
tcactgaagagggacaaatctaaagtaaatcccctcttccaaagtgctgtggacaaggcc
ttacagagtccaaatggaaacctggatttatttctccgcttcctcctgggtctttcactg
aagaccaatcagacacttttacaaggactgctaaaaccaccacgaggcagcttagagaac
tatcaggaaacagtcaaatacatcaagaggaaaatcaggaaaaatccctctccagagaga
tgcatcaacctctttcactgtctgaatgagctgaatgataattctcttgtggaggagatc
caacagtacgtgagttcaggaagtctctccacagacaaactgtctcctgctcagtggtcg
gctctggccttcatcttactgtcatcagaaaaagatctggatgtgtttgacttgagtaag
tactctgcttcagaggaaggtctcctgaggctgatgccagtggtcaaagcctcaagaata
tctcggttgagtgactgcaagttgtcagagagaagctgtaaagccctggcctgtgttctt
atgtccaagtcaactcgtctgagagaactggacctcagtaacaatgacctgcaggattct
ggagttaagctgctgacttttggactggggagtccacagtgtaaactggaaactctaggg
ttacgtggctgtaacttgtcagagacaagctgtgaaactctggcctcagttctcagctcc
cagtcctcccacctgagagagctggatctaagtgacaatgatctgcaggactcaggaatg
aagctgctgtctgcaggactagagagccctcagtgtagactggaaaatctcaggttgtca
ggctgtcaggtcgcagaggaaggctgtgtgtctctggactcagctttgagctccaacccc
tcccatctgagagaactggacttgagctacaattatccaggatacttgggagtgatgctg
ctctctgcgagacttgacagtccacagtgcagactggacacgctctgtgttgactatggt
ggaaggcatcgcttgaaacccttcatgtatgcctgtgaactcaatctggacccgaacaca
gcacacagtcagctctctttgtcagaagacaacagaaaggtgacagagatgacagaggta
cagccttatcttgatcatccagacagatttcaccactggaagcaggttctgtgtagagaa
ggtctgagtagcagctgctactgggaggtgaagtggaaagggtgggtgaatgtaggagtg
acatacagaggaatcaaaaggaaaggagactctaatgaatgttgtcttggtgagaacagc
aggtcctggggtctcttctgttctgttcatggttactctgcctgtcacaataagagaaca
acaggcataccggcccgcacctcctcatctgactctggcaaagttgcagtgtatctggac
tggtctgctggtactctgtccttctacagggtatctgctggtgcactgatccacctccac
accttccactgcacattcactgaacctctctatcctgcgttcagatttaagttacagtgt
gcatgtgaatcgtctgtgtctctgtgcaagtttgagtag
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