Scomber scombrus (Atlantic mackerel): 133999580
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Entry
133999580 CDS
T10651
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
ssco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133999580
03015 mRNA surveillance pathway
133999580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133999580
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133999580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
133999580
NCBI-ProteinID:
XP_062294793
LinkDB
All DBs
Position
18:complement(13917190..13922943)
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AA seq
280 aa
AA seq
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MAPSPTKRKEEEKTKDRGKEKTSTKDGDKERGRDKVRKRRSASTGSSSSRSRSSSTSSSS
SGSSSGSSSGSSSSGSSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSASKTQKRGD
DKERRKRSPSPKPTKVHLGRLTRNVTKEHIQEIFSTYGKIKMVDMAMDRLYPHLSRGYAY
VEFETPEEAQKALKHMDGGQIDGQEITASAVLPQRVRPPPRRPSPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPARRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgtcacccacaaagcggaaggaggaggaaaaaacaaaagacagaggcaaagaa
aagactagtaccaaggatggagacaaggagagaggacgggataaagtaaggaaacgccgc
agcgcttctactggcagcagcagcagcaggtccagatctagctctacttcaagcagcagc
tctggttccagctcaggttcctccagtggatccagttcatctgggtccagccgctctggt
tcttctagctctcgttcctcctcttcttccagctcctctggctctcccagccccagccgc
cgacgccatgacaaccgccgacgctcccgctcagcgtccaaaacacagaagaggggagac
gataaggagagaaggaaaagaagcccaagtcccaaaccaactaaagttcatttagggcgg
ctgaccaggaatgtcaccaaggaacacatccaggagatcttttctacatatgggaaaatc
aaaatggttgacatggcaatggacaggctttacccacacctgtccaggggttacgcctat
gtggagtttgagactcctgaggaggcccagaaggccctcaaacacatggacggaggtcag
attgatggtcaggaaatcactgcgtctgctgtgctgcctcaacgtgtccgtcctccacct
cgtagaccctctccccctcgtagaatgcctccaccaccacctatgtggcgtcgcagccca
ccacgcatgaggagaaggtcccgttccccaaggaggagatccccagcacgccgccgctct
cgctccagatctcctggtcgcaggcgccaccgctctcgttccagctctaactcctcccga
tag
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