Scomber scombrus (Atlantic mackerel): 133999649
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Entry
133999649 CDS
T10651
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
ssco
Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133999649
03041 Spliceosome [BR:
ssco03041
]
133999649
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133999649
Spliceosome [BR:
ssco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133999649
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_PNO1_2nd
KH_Vigilin
Secretin_N
Motif
Other DBs
NCBI-GeneID:
133999649
NCBI-ProteinID:
XP_062294889
LinkDB
All DBs
Position
18:16336815..16344747
Genome browser
AA seq
669 aa
AA seq
DB search
MSEYNAVPPPGSGAPVGGQAALGNGAGGVKKDAFADAVQRARQIAAKIGGDAGPPMNNNN
ASDGFQFTAQKRQLEDADEPESKKLATQSDLDSAAALSIGAQLAALAHQRPTTSTEEYSV
PDSMVGLIIGRGGEQINKIQQESGCKVQIAPDSGGLPDRSVSLTGSPDSIEKAKMLLDEI
VSRGRGTPPSSYHESTNGQNGAVHEMMIPAGKAGLVIGKGGETIKQLQEHAGVKMILIQD
ASQGPNVDKPLRIIGDPYKVQKAQEMVQEILRERDQGGFSERNDYGSRMGGGMDIAVPRH
SVGVVIGRNGEMIKKIQNDAGVRIQFKQDDGTGPDKIAHISGPPDRCEHAAQIINDLLQS
IRVREEGQGGPPGPPGIPAGNRGRGGGQGGWGPPGGEMTFSIPAHKCGLVIGRGGENVKS
INQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDLAKQLIEEKIEGPLCPVGPGPGGP
GPAGPMGPYNPNPYNPGPPGAPGPPHGGPPGPHQYTPQGWSNTYQQWQPQAPHDPSKAAA
NDPNAAWAAYYAQYYQQPSGAVPAQYPANPGGGAQTSGDQTQPAQTPGGQPDYTKAWEEY
YKKMAQAGGSAPGTAAAAPGAAGGAASTSGGQPDYSAAWAEYYRHQAAYYGQTGQASGQP
ATPQQGQAQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtacaacgcggtacctccacccggctccggggcccctgtcggcggacaggca
gctctcggtaacggggcaggaggcgtcaagaaagacgcgtttgcggacgcagtgcagcgg
gcccggcagattgcagccaagattgggggcgatgccggtcctcccatgaacaacaacaac
gcttcagatggctttcagttcactgcacagaaacgacagctggaggatgcagatgaacca
gagagcaagaagctggctacacagagtgacttggattcagccgcagcattgtctattggc
gcacagctagctgctcttgcacatcaaaggcccaccacttccacagaagagtacagtgtt
ccagacagcatggtgggactcattattggccgtggaggtgaacagatcaataagattcag
caggagtcaggttgcaaggtgcagatagctccagacagcggaggtcttccagataggagc
gtctctcttacaggttcacctgattccatagagaaagccaagatgcttttggatgaaata
gtttcacgagggaggggtacacccccgtcttcttatcatgagtccaccaacgggcagaat
ggcgcagttcatgagatgatgatcccagctggcaaggctggacttgtcattggcaaggga
ggagagaccatcaaacagctacaggagcatgcaggggtgaagatgatcctgatccaggat
gcctctcagggacccaatgttgacaagcccctgcgcattattggagatccatacaaagtc
cagaaagcccaagaaatggtgcaggagattttgagggagagagaccaagggggttttagt
gaaagaaatgactacggctctcgaatgggaggaggcatggatatcgcggtaccacgacac
tcggttggtgtggtcatcgggcgcaacggagagatgatcaagaaaatccagaatgatgcc
ggagttcggatacagttcaaacaagatgacgggactggtccagataagattgcccacatc
agcggcccccctgaccgctgcgaacatgcagcccagatcataaacgacctgctgcagagc
attagggtcagggaggagggacaggggggccccccaggtcctccaggcatacctgcgggc
aacaggggtcgaggtgggggacaaggtggttgggggccccctggaggggaaatgacattc
tctatccctgcccacaagtgtgggctcgtgattggtcgaggaggtgagaacgtcaagtcc
atcaaccaacagacgggagcctttgtggaaatctcacggcagcccccccccaacggagac
cccaacttcaagctgtttatcattcggggctcaccgcagcagatcgacctcgccaagcag
ctgattgaagagaagattgagggtcctctgtgtcctgtgggcccaggacctggtgggcca
ggtcctgctggtccaatgggtccctacaacccgaacccatacaaccctgggccgcccggg
gcccctgggccaccacatggtggtcctccaggtcctcaccagtacactcctcagggttgg
agcaacacttaccagcagtggcagccacaggcaccccacgaccccagcaaggcagcagcc
aatgaccccaacgcagcgtgggcggcctactacgctcagtactaccagcagccgtcgggg
gctgtgccagcccagtaccccgcaaacccaggtggaggtgcccaaacttcaggcgaccag
acccagcccgcacagacgccggggggacagccagactacaccaaggcctgggaggagtac
tacaagaagatggctcaggcaggcggatccgctccggggacagcagctgcagctccagga
gcagcagggggagcagcatccacatcaggaggccagccggactacagcgcagcctgggca
gagtactacaggcaccaggctgcgtactacggacagacaggacaggcctctggtcagcca
gccactccccagcaaggacaggcacagtga
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