Scomber scombrus (Atlantic mackerel): 133999713
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Entry
133999713 CDS
T10651
Symbol
llgl1
Name
(RefSeq) lethal(2) giant larvae protein homolog 1 isoform X1
KO
K06094
lethal(2) giant larvae protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133999713 (llgl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133999713 (llgl1)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133999713 (llgl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Lgl_C
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
133999713
NCBI-ProteinID:
XP_062294967
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All DBs
Position
18:19656634..19691182
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AA seq
1067 aa
AA seq
DB search
MMKFRFRRQGTDPQREKIKQELFAFNKTVEHGFPHQPSALAFDPKLQLMAIGTKSGAIKV
YGEPGVEFTGLHQDTTAVTQIHFLPGQGHLLSLLDDNTIHLWELVAAAPREVGGVKREGV
VSLQEVGSYSLPGRPGIESCSATRVTVLLLLRSCDLLCIGTEGGGVYFLDLPHLLLKDNQ
TLLQDQVTQSLPEDYRCGKSLGPVESLQEHPQQPGVILIGYSRGLVVLWDLSTRHADQLF
LGKQQLESLVWERSGNLFVSSHSDGGYSVWAVTSGNTYKHQPESSTIPYGPFPCKAINKI
LRRTTETGSSVLLYSGGMPRASYGDRHCLTIQQDKDHVTLDFTSRVIDFFTVHSIEQEKE
FDDPSALVVLLEEELVVIDLKTPGWPSVPTPYLAPLHSSAITCSCHISSVPPKLWERLVN
AGKAQQGRQHAHGSWPICGGKNLAPPPKQQELLLTGHEDGTVRFWDASGVALTPLYKLST
ANVFHTDCDPSDDPQDPSDDPDMQQEEEWPPFRKVGCFDPYSDDPRLGIQKIGLCKYSNK
LVVAGTAGQVIVLGLSDERSDHSVDVSVVDLLQDREGFTWKGHDRLEPRLKPAPFPPGFQ
PLVLVQCLPPASVTAVALHAEWNLISFGTSHGFGLFDYHRRNAVLARCTLHPNDSLAMEG
PLSRVKSLKKSLRQSFRRIRKSRVSGKKRTITTPTSKVQEANAALAEQEDMAPIQRRIEP
RSADDSLSGVVRCLCFADTFLRDGTHHGPTLWAGTNSGSVYAYALEVPGVGSGRVCERGG
AGESSVCVEAVLGKEIQLMHRAPVVSICVLDGRGKPLPDPYEASQDLSIAPDMTNAHSVL
IASEEQLKVFSLPKVSAKTKFKLTAHEGCRVRKVALVVFNSAAQEDYSEHTLVCLTNLGD
MHLFNIPGLRPQVRYDCIRKEDISGIASCVFTKYGQGFYLISPSEYERFSLSAKVLTEPL
CSVQLDRPLESTLASDGTTTQPQANGTHKNQMGQAEGQTEEPPSTLSSPILETPLDSPLS
CADLTLDSTGEITVEDVRDFLTTVDEAENNLKNIKEEEGRSTGILIN
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtttaggtttcgtcggcagggcaccgacccgcagagagagaagataaaacag
gagcttttcgccttcaacaagactgtggagcatggattcccccatcaacccagtgctttg
gcctttgaccccaagctgcagcttatggccatcggcacaaagtcaggagccatcaaagtc
tacggggagcctggcgtggagttcacaggactacaccaagacaccactgctgtcacacag
atccacttcctgcctggacagggtcatctgctgtcactgctggatgacaacactattcac
ctgtgggagctggtggccgcggcccccagggaagtgggaggtgttaaaagagagggcgtg
gtctctctacaggaagtgggcagctacagcctcccaggaagacctggcattgagagctgc
agtgccactcgggtgacagtcctcctcttgctgaggtcgtgtgacctgctctgcattgga
acagagggagggggcgtgtacttcctggatctgccccacctcttgctgaaggacaaccag
acgctgctccaggatcaggtcacacagagcctgccagaggactacagatgtgggaaatct
ttggggccggtggaatctcttcaggaacatcctcagcaaccaggggtgattctgattggc
tacagccgaggcctggttgtcctatgggacctgagcacccgtcatgccgatcagctcttc
ctgggcaaacagcagctggagagcctggtgtgggaacgttctggaaacttatttgtcagc
tcccatagcgatggtggctactctgtgtgggctgttaccagcggcaacacctacaaacac
cagccagagtcctctaccatcccatatggaccatttccctgtaaagccatcaacaaaatc
ctgaggaggacaacagagacaggctcatcagtgctgttatacagtggagggatgccccga
gccagctacggtgaccgccactgtctgaccattcaacaggacaaagaccacgtcactctg
gacttcacgtcccgagtcatcgacttcttcactgtccacagcatagagcaagagaaagag
tttgacgacccgtcagcgttggtagtgctactagaagaggagctggtcgttatcgacctc
aagacccccgggtggccttctgtgcccactccctacctggctcctctccactcctcagcc
atcacctgctcctgccacatctccagcgtcccgcccaaactttgggagaggctggtcaac
gctggcaaagcacagcagggccgccaacacgcacacgggagttggcccatatgtggaggg
aaaaacctggcacctccacccaaacaacaagagctgctattgacaggacatgaggatggc
actgtgcgtttctgggatgcgtcaggtgttgctcttacaccactgtacaaactcagcaca
gccaacgtcttccacactgactgcgaccctagcgatgaccctcaggaccctagcgacgac
cccgacatgcagcaggaggaggaatggccgcccttcaggaaggtgggctgttttgaccca
tacagcgatgaccccagactgggcatccagaagatcggtctgtgcaaatacagtaacaag
ctggtggtggctgggactgctggacaggtgatcgtcctgggtttgagtgacgagcgttcg
gaccattcggtggacgtttcggtggtcgacctgctgcaggacagggagggcttcacctgg
aagggccatgacaggctggagccgcggcttaaacccgcccccttccccccaggctttcag
ccgctggtgctggtgcagtgcctgcccccagcctctgtcacagcggtggcactgcacgcc
gagtggaacctgatctccttcgggacgagtcatggatttggcctgtttgactaccacaga
cgaaacgctgtgctggccaggtgtaccctgcaccctaatgactccttggcgatggagggt
cccctgtccagagtcaaatccttgaaaaagtccttacggcagagcttcagacgcatccgc
aagagcagagtgtctggaaagaaacgcaccattaccacgccaaccagcaaggtccaagag
gcaaacgctgctctagcagagcaggaggacatggctccgatacagagaaggattgaaccc
cggtcagcagacgactcgctgtctggagtggtccgatgtctctgtttcgccgacaccttc
ctgcgtgatggtacgcatcacggccccacactgtgggcgggcaccaactccggcagtgtg
tacgcctacgctctggaggtgcccggcgtgggctcggggcgcgtgtgtgagcggggcggc
gcgggagagagcagtgtgtgtgtggaggcagttttgggtaaagagatccagctgatgcac
agggcccccgtggtgtcgatctgcgtgttggacggccgggggaaaccgctaccagacccg
tacgaagcctcgcaggacctctccatcgccccggacatgaccaacgctcactctgtgctc
atcgcctccgaggaacagctcaaggtgttttccctccccaaggtcagcgctaagaccaag
ttcaagctgacagcgcacgaaggctgtcgggtgaggaaggtggctctggtggtcttcaac
tcggcagctcaggaagactacagcgaacacacactggtctgtctgaccaacctgggggac
atgcacctctttaacatacctggccttagaccgcaggttcgctatgactgcatccgtaaa
gaggacatcagcggcatcgcatcctgcgtcttcaccaagtacggacaagggttctacctg
atctctccctcagagtacgagaggttctccttgtctgccaaggtcctcactgaaccgctc
tgctctgttcagctggaccggccactggagtccacactggccagcgatggtacgacgacg
cagccgcaggccaacggaacccacaagaaccagatgggtcaggctgagggacaaacagaa
gagcctcctagcaccctgtcgtctcccatcctggaaaccccgctggactccccactcagc
tgcgccgacctcaccctcgactccaccggagaaatcaccgtggaggacgtcagggatttc
ttaaccactgtggacgaggcagagaataacctgaagaacatcaaagaggaggagggacgc
tcgaccggcatcctcatcaattga
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