Scomber scombrus (Atlantic mackerel): 133999718
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Entry
133999718 CDS
T10651
Name
(RefSeq) alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1
KO
K09661
mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [EC:2.4.1.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00510
N-Glycan biosynthesis
ssco00515
Mannose type O-glycan biosynthesis
ssco01100
Metabolic pathways
Module
ssco_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
133999718
00515 Mannose type O-glycan biosynthesis
133999718
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133999718
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
Wide specificity
133999718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_18
SKA2
Bot1p
Motif
Other DBs
NCBI-GeneID:
133999718
NCBI-ProteinID:
XP_062294973
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Position
18:complement(18275925..18333586)
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AA seq
794 aa
AA seq
DB search
MIATSSDLSIMVRRCLLTFKPFRIFVVGIGFFSLCFLMTSLGGQFSAKRPGDSPFTVRAE
VLGGQESRGVLRKISDMLEVIMKRMDALSKLGNTTDTHRLDELNSALDRIQPIGLVERIQ
AIAQNMSDMAVRVEQILQRSMTTTNRVRDGALGQCEIPKDPRYPDCTSKMDWMRARWTSD
PCYAFYGVDGSDCSFLIYLSEVEWFCPPLVWRNQTVTPTLKPPSKRQAVFQSDIGTLLEQ
VGTGKESLSFMKRRIRRLAAQWASAARRLNDKLRNHWREQKRILVHVGFLTEESGDVFSP
KVLKGGPLGEMVQWADILTALHVLGHNLKISVSLKELHGFLGVPPGRGSCPLTGPLPFDL
IYTDYHGLQQMKQHMGLSLRKHKCHIRVIDTFGTEPAYNHEEYATLHGYRTNWGYWNLHS
QQYMTMFPHTPDNSFMGFVAEELNETERLSIQRNKVNNMAVVYGKEASMWKLQGKEKFLA
ILHRYMEIHGTVYYETQRPPEVPAFVKNHGLLPQQELQQLLRKAKLFIGFGFPYEGPAPL
EAIANGCIFLQPKFNPPHSSLNHEFFRGKPTSRKVSSQHPYAEQYIGRPHVITVDFNNSE
EFDTAIREIMTTKVEPFLPYEYTCEGMLERVHAYIQNQDFCSPEAPFPPMNSSRVWLSGP
PSPFTLLSNSSILTWASNDTSYKSWPPLSALRLLASLEGQSCVKACQSAGLICEPALYRF
INIKEAFSALDFQCEGVESEMNHLFPAFSAEHSECSLQQNLLLFSCAGSSAKYQRLCPCR
DYRNGQVALCRDCL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaaccagcagcgacctttccattatggtgaggagatgtcttctcactttcaaa
ccgttcaggatctttgtggtggggattggcttcttcagcctgtgctttctaatgacctcc
ctcgggggccagttctcggccaagcgacccggagattcccccttcactgtgcgagctgaa
gtacttggtggccaagaatctcgcggggtactgaggaaaatcagcgacatgctggaggtc
atcatgaagaggatggacgctctgtcaaaactgggtaacaccactgacacccacagactg
gatgagctcaactcagctctggacaggattcagcctatagggctggtggagcggatccag
gccatagctcagaacatgtctgacatggcggtgagggtggagcagatcctacagcgcagc
atgaccaccactaaccgagtaagggatggagcattaggacaatgcgagattcctaaagat
ccccgttatccagactgcaccagtaagatggattggatgcgtgctcgttggacctcggac
ccttgctatgcgttttatggtgtggacggctctgactgctcctttctcatctatctgagc
gaggtggagtggttttgccccccactggtctggagaaaccagactgttacacccaccttg
aagcctccatccaagagacaggctgtcttccagtctgacatcgggactctgctggagcag
gtgggcactggaaaggaatccctgagcttcatgaagagacgcatacgcaggctggcagca
cagtgggcctctgctgctcgacggctgaatgataagctccgcaaccactggagagagcag
aaaaggattctagtccatgttggctttctgacagaggagtccggggatgtcttcagtccc
aaagtcctgaaagggggtcctctgggtgagatggtgcaatgggccgacatccttacagct
cttcatgtcctgggacacaacctcaagatctctgtttctctcaaggagttgcatgggttt
ctgggggtccctccaggaagaggaagctgccctctgacaggacctctgccctttgacctt
atctacactgactaccacggcctgcagcagatgaagcagcacatgggtctgtcgctgagg
aagcacaagtgccacatccgagtgattgacacttttggcactgagcctgcatacaaccac
gaagagtatgccactctgcacggctacagaaccaactggggctactggaaccttcacagc
cagcagtacatgaccatgttcccccacaccccagacaactcttttatgggttttgtggcg
gaggagctgaatgagacagagagactgagcattcagaggaacaaggtcaacaatatggct
gttgtgtatggcaaagaagccagcatgtggaagcttcaaggtaaggaaaagttcctggcc
atcctgcatcggtacatggagatccacgggacagtgtactatgagacacagcgcccccca
gaggtgcctgcctttgtcaagaaccatggtctactgcctcagcaggaactgcaacagctc
ctcagaaaggctaagctgttcattggatttggcttcccatatgaaggtcccgcccctctg
gaggccatagccaatggctgcatcttcttgcaacccaagtttaatccccctcacagttct
cttaatcatgaattcttcagagggaagcccacctccaggaaggtgtcctctcagcatccc
tatgcagagcagtacatcggcaggccgcatgtcatcactgttgacttcaataactctgaa
gagtttgatacagccatccgtgagatcatgacaaccaaagtggagccattcttgccctac
gaatacacctgcgagggaatgcttgaaagagttcatgcttacatccagaaccaggacttt
tgttctcccgaagctccatttcctcccatgaactcatctagggtttggctgagcggccct
cccagccctttcaccctcctgtccaactccagcatccttacttgggcctccaatgacacc
tcctacaagtcctggccgcccctcagcgcactgcggcttttggcttcgctggagggccaa
tcgtgtgtgaaagcatgccagagtgcaggattaatctgtgaacccgccttgtatcgtttc
atcaacattaaagaggccttcagcgcgctggacttccagtgtgagggagtggagtcagag
atgaaccacctctttccggccttctcagctgaacattctgaatgttccctgcagcagaac
ctgctgctgttcagctgcgccggctccagcgccaaataccagcgcctttgcccctgtaga
gactatcgtaacggccaggtggcactgtgcagagactgcctatga
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