Scomber scombrus (Atlantic mackerel): 133999844
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Entry
133999844 CDS
T10651
Symbol
atf4b
Name
(RefSeq) activating transcription factor 4b
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04137
Mitophagy - animal
ssco04141
Protein processing in endoplasmic reticulum
ssco04156
Integrated stress response (ISR) signaling pathway
ssco04210
Apoptosis
ssco04261
Adrenergic signaling in cardiomyocytes
ssco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133999844 (atf4b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133999844 (atf4b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133999844 (atf4b)
09143 Cell growth and death
04210 Apoptosis
133999844 (atf4b)
04156 Integrated stress response (ISR) signaling pathway
133999844 (atf4b)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
133999844 (atf4b)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
133999844 (atf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133999844 (atf4b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
133999844 (atf4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Nop53
Kinocilin
Motif
Other DBs
NCBI-GeneID:
133999844
NCBI-ProteinID:
XP_062295152
LinkDB
All DBs
Position
18:complement(20146997..20149951)
Genome browser
AA seq
453 aa
AA seq
DB search
MTMMMTNSQFGLEDMEALLWEPSSPMVDAIGSMLFHPDQEEQHEGGGSSMEGATSPVSSL
TSSSLSSSSPPPFYSPPPSPPAVLLHGDKAGTESELLSLPWLGHSGQLRCTQTVLDCGKE
DAFGDLDWMAERMDLSEFDLDSLIGSCSPAEESPSSPEDLLASLDCPMELDSLPIPALST
PALSSLPTASPSILPVTLPSVCSDPPVIPAVEPASHIDGQEVPSPCLCVPEPQEELEIKS
EPASPDPSSHLVDSPSSPVYTLDLGSEVDVSESEVKPVVASVVPQVPRLVLSLSPTRIVL
VLAPKNEIGITTTTVTTTSEVIHSSPPASPPQKSSRSRPYPEPKYKAIPASPSATSVKVK
TLPGAGGEERTSLKVVKNKKIKKMEQNKTAATRYRQKKRVEQESLSAEHEVLERKNMELT
EKAESMAREIEYLKELMAEVRSTRVKKGLSADP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgatgatgacaaactcacagtttggcctggaagacatggaggcccttctttgg
gagccttcctctcccatggttgatgccataggctccatgttatttcaccctgaccaagaa
gaacaacacgaaggaggagggtcctcaatggagggggccacatcacctgtgtcatccctc
acctcctcatcgctgtcttcttcctctcctcctcccttctactcacctcctccctcacca
ccggccgtcctcctccatggggacaaagccgggactgagtctgaactgctctccctcccc
tggttgggccactccggtcagctgagatgtacccagacagtcttagattgtggcaaagag
gatgcgttcggtgacctggactggatggccgaaaggatggatctgagcgagtttgacctg
gactccctgattggctcatgcagtcctgctgaagagtcccccagctcaccagaagacctc
ctggcctccctggattgccccatggagcttgactccctgccaatacctgctctctcaact
cctgcactctcaagtcttcccactgcttctccaagtattcttcctgtcacccttccctca
gtctgttcagatcctcctgtcattccagctgttgagcctgcatcccacattgatggtcag
gaggtcccttccccttgcctgtgtgtcccagagccacaagaggagttggaaatcaaatct
gagcctgcctcccctgacccctcttcccatttggttgactctccctcctccccagtctat
accttggacctgggcagtgaagtggatgtctcggagagtgaggtgaagccagtggtagct
tctgtggtccctcaggtcccgaggctcgtactctccctatcaccaacccgtattgtcctg
gttctggctcccaaaaatgaaattgggatcaccaccaccactgtaaccaccacttcagag
gtcattcactcctctcctccagcctcccctccacaaaagtcctccagaagcagaccatac
cctgagcccaaatataaagccatcccagcctcccccagtgccaccagtgtcaaagtaaag
accctcccaggagcgggtggagaggaaaggacatctttgaaggtggtaaagaacaagaaa
attaagaagatggagcagaataagacagctgccactcgttaccggcagaagaagagagtt
gagcaggaatcgctttcggcagagcatgaagtgctggagaggaagaacatggagctgact
gagaaggctgaatccatggccagggagatcgagtaccttaaagagctgatggcagaggtg
cgctcgaccagggtcaaaaaaggtctcagtgctgacccttag
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