Scomber scombrus (Atlantic mackerel): 133999864
Help
Entry
133999864 CDS
T10651
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssco00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ssco01100
Metabolic pathways
Module
ssco_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
133999864 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
133999864 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133999864 (xylt2)
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
133999864 (xylt2)
Glycosyltransferases [BR:
ssco01003
]
O-Glycan biosynthesis
Glycosaminoglycan
133999864 (xylt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
133999864
NCBI-ProteinID:
XP_062295182
LinkDB
All DBs
Position
18:complement(17995974..18010024)
Genome browser
AA seq
873 aa
AA seq
DB search
MVASARVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERKTRRSKLPDHNSQDP
KRDAVLWEKQKRNQGRWSSRLERTGGTAASALRRATSRRGGKPSNRLKAPQERGMTGLEG
VVPHDPSSSRNFSEIRGGTEGAAKLPAAAMPGEPGSVDGAHQAPSSDFVPKCDIIGKDAL
SALHRAGSQQCRQEIANIVCQHQAGQLMPDTLPQFCPQLGVSNPVQAVGELDNSLSKVEN
PVRVAFVLMVHGRAVRQLKRLMKAIYHRDHYYYIHVDKRSSYMHREVLQIAQQYPNIRAT
PWRMVTIWGGASLLKAYLRSMQDLLSMLDWKWDFFINLSATDFPTRTNDELVAFLSQHRN
KNFLKSHGRENARFIKKQGLDRLFHECDIHMWRLGERSIPEGLEVSGGSDWFALTRRFVE
YVINSQDDLVSGLKQFYSYALLPAESFFHTVLGNSHMCDSLVDNNLRVTNWNRKLGCKCQ
YKHIVDWCGCSPNDFKPQDLIRIQQLTRPTFFARKFESTVNQEAIEILDTHLYGQYAPGT
IAIKAYWESLFEQSDGVGSLSDVALTAYTSFFRLGLKSLVTTQSNMESCRFEPVGFPLSV
HVYFYDDRFQGYLVRQEVQAVGSKVKETVEMWAVPQATLVLEKNLKEFERLKSLEIGTEW
DPKERIFRNFGGVVGPLDEPLAVQKWARGPNLTATIVWIDPALVVAASYDITVDLDAEYT
QYKPPLQRPLRPGSWTVRVLKQWERVAEVHFLVMPLTFKDKEPLRIEEDSWLHAGPPGNL
YLEQSFQQMSTVLKLPPQEPAMQAAQRNAQLVGQALDEWVDSGVAAFWVIGNLCTTQTSS
CPALAACSKTSWSSLSPDPKSEMGPVKSDGRIR
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgctcgagtacagaagctcctccgacgatataaactcgcgattgccgcc
gcattaaccatcctcctgatccaagggcttgtagtatggagtctgagaagtctggaagag
ggcgaggcagagaggaaaacgagacggtctaagctgcctgaccacaacagccaggaccca
aagagagacgctgtactttgggagaaacaaaagaggaaccagggcagatggagctccagg
ttggagaggacagggggcacagcagccagcgcgctgaggagagcaaccagtcgcagagga
gggaagcccagcaacaggctgaaggctccccaagagcgagggatgacgggattggaaggt
gtagtccctcatgacccctccagcagccgaaacttcagtgaaatcagaggtggcacagag
ggggcggccaagttacctgctgctgccatgccaggggagccaggcagcgtggatggggcg
caccaagcccccagcagcgactttgtgcctaaatgtgatatcataggcaaggacgcgctg
tctgccctccatcgcgctggatcacagcagtgccggcaggagatcgccaacattgtctgc
cagcatcaggctgggcagctcatgccagacacacttccacagttctgtccccagcttggt
gtatcaaatccggtccaggctgtgggtgagctggacaacagcctgtccaaggtggagaac
cctgtcagggtggcttttgttctgatggtccacggtcgagctgtacggcagctcaagcgc
ctcatgaaagccatataccaccgtgaccactactattacattcatgtggacaagcggtcc
agctacatgcatcgggaggtcctgcagatcgcccagcagtacccaaacatacgagccacg
ccttggcggatggtcaccatctggggtggtgcgagcctactgaaggcttacctacgcagc
atgcaggacctgctctccatgctggactggaagtgggattttttcatcaatctcagtgcc
acagacttccccaccaggactaatgatgaactggtggcgttcctgtcgcagcacagaaac
aagaacttcctcaagtcccacggcagagagaatgcacggtttattaagaagcagggcctt
gaccgtctcttccatgagtgcgacatccacatgtggcgtcttggcgaacgcagcatcccc
gaaggcctggaggtttccggcggctccgattggttcgcgctcactcgtcgctttgtggag
tacgtcatcaactcccaggatgacctggtgtcagggctgaagcagttctattcctacgcg
ctgctccccgctgagtccttcttccacacggtgctcgggaacagtcacatgtgcgacagc
ctggtggacaataacctgcgtgtcaccaactggaaccgtaagctgggctgtaaatgccag
tacaagcacattgtcgactggtgcggctgctcacccaatgacttcaaaccccaagacctc
atcaggatccagcaattgacccgtccaacattttttgcccgcaagtttgagtcaactgtg
aaccaagaggccatagaaatccttgacactcacctctatggacagtacgctccgggcacc
atcgccattaaggcatactgggagagcctgttcgagcagtcggacggtgtcggctcactc
agtgacgtggctctcactgcttacacttctttctttcgccttggtctgaagagtctggtg
acaactcagagcaacatggagtcctgcaggtttgaaccagtaggcttccctctatcagta
cacgtgtacttctatgacgaccgttttcaagggtacctggtgcgtcaggaagtccaggct
gtgggatcaaaggtcaaggagacagtagagatgtgggcagtgccccaagccaccctcgta
cttgagaagaaccttaaggagtttgaaaggctcaagagcctggagattggcacagagtgg
gatcctaaggaaagaatctttcgtaactttggtggggtcgtcggtcctttggatgaacca
ctggcagtccagaagtgggctcgtgggcccaacctcacagccactatagtgtggattgac
ccggctctggtggtggcagcatcgtacgacatcaccgtggatctagacgcagagtatacc
cagtacaaacctccactgcagcgccccctgcggcctggcagctggactgtacgggtgtta
aaacagtgggaacgtgtggcagaagttcattttcttgtcatgcccttaaccttcaaagat
aaggagccactacggatagaagaggacagctggctccacgcaggtcctccaggtaacctg
tacctggagcagagctttcaacagatgagcaccgtgctgaagctgcctccccaggagccg
gccatgcaggcagcccagcgtaatgcccagctggtgggccaggcccttgatgagtgggtg
gacagcggtgtggcggccttctgggtcataggcaacctgtgtaccacacagacttcatcc
tgtccagcattggcagcatgctccaaaacatcctggagctccctgtcaccagaccccaag
tctgaaatgggcccagtcaaaagtgacgggcgaatcaggtag
DBGET
integrated database retrieval system
