Scomber scombrus (Atlantic mackerel): 133999952
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Entry
133999952 CDS
T10651
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133999952
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Others
Others
133999952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAD7
SAM_1
DUF5757
TPR-S
Motif
Other DBs
NCBI-GeneID:
133999952
NCBI-ProteinID:
XP_062295284
LinkDB
All DBs
Position
18:16273378..16279851
Genome browser
AA seq
1549 aa
AA seq
DB search
MENTSSEIEWQNLPYDRWTECHVSSWLRCIGIKENHIVKLAEEEVTGPVITTLQREFLSN
TIGMKGGQIEHLLKKRDDLLKSKPNKVKKESDLSEKSKDDIKKELLLPEQEPNPSTQKPC
ERAERENTTTECSDHSTSTGMTSSFCNYQTFDQREQHYRYVKHDVLPPETGIENMIVPCH
EYKSLENAHKLDSKRLQTKLASEVLRFTCACMNMRTNGTIHFGIMDKIRGKHRHGEIIGI
PICNREDFVDALDYIEKCFKGSSQQSDARKCIRNPRFIEVIDKETTEKTWVIEYDVVPKA
STVKDKLYYVGLPKFSEKDKKVKCEEKVPYHRVGAKTPRIHDDDFFNFIKGLTEKDQQRE
EAESSSNQTAVDFKEDQKRKLSILLTCGKTHMDNSLFYIIVRNKFHPEHLDSIGFLVNMN
LFCVFDFDPDSKTSGLCARYKEHKPATPRFLDDYAMKTADFINSLQLFERTSWIFCNGRN
NFPGGDQTCDEKTWIKTRKKKLKKAVSVICNEILPRHSFVVLFLLMSDVEQPLVETFHEF
YAEMNGNDFLAVVSESKENYKKWSSLAQVSCDMSTLKEISIVEMPLSHVDATVQSIQLSK
NQSTRTLPVLNGGRCFLKSVEEALLDSLEIISVDQCDDTKLEIMSKDEIEQIESYFCQGG
KIDWINFWLADKHKCGDIIKRDAYQEAYKILDNIAQHTKVIRPIESVNIYHQPGSGGSTV
ARQILWSWRTNVRCAVVKQCKEITTVCDHAVRLREHDERDQNNCLPVLLLLEDRNADYID
DLRQELGNVIATKKICQSVVCFILLICNRSNDPGKMCRASSSQTVAVTHELTPAEKPLFT
KKLEQLKQHIHPDFILTFVLMSEEFSKSYIKGFVKNLFDNIDHSSLLTRLIRFVALLNCY
VEDSYISVSHCEASLGIATIVDRAKYHAFVDHLSEEARLLFIHLRDASTHISSIRIIHPR
VAKEILHKLSANLPQSDIAMDLINDKVLINHRFNRDEFLKFIRALFIKRNKKSRGDSKDT
AFSPLIEHVSKNIGDVQKAVDLLKAAYLALGKDAYVAQQLAQLLYTKLRFEEALEWAEEA
KFLLPYDTFVLDTLGQVYKRWFYHLYDTLEEKEPSPERGTEIIHIALKGISAFRASEKTP
KKETVSLNSSYYGEVDVCCRLLKFLSGVDVFSNNTGKSELMQYLLTDYIPAEVKKPWQMF
HQQLKGLQKSLGHALECISEDLSYFQTDISEEDEELDARDPEQVYNPREWLTRKSAVYAG
FFCIIPDESVQAAESNSTDVAGPAKKLSAFQRQMKTYKLGGGNVTSILSLLYDKDPQRAG
KKLETIISMYPENMTWNDLDQTELANFIFCQIALNCTLPGSSKLLSLEKLQELSKRFITK
GKNMSSASALFLLSLLFWPETSGELSSAGSRILLSAIDALQRIYEQKIKHVSPRKSRIVT
HFFLAKAKGLNKIVHRIAIEKQIKGTLSERKLQWLGGEVWKNREVVQLLKRVEGWTENGN
LIVKGGTTDSKIRVFPRYSASLPNGNENVTFYLGFSFDGVVASDIQIME
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacacttcttcagagatagaatggcaaaatctcccctatgacagatggacagaa
tgtcatgtgagctcctggttgagatgtattggaataaaagagaaccacatagtaaaactg
gcagaggaggaggtgacaggaccagttatcacaactctacagagggaattcctcagcaac
acaattggaatgaaaggtggccaaattgaacacctactcaagaaaagagatgatctttta
aagtcaaaaccaaacaaagtgaaaaaagaaagtgatttaagtgaaaaaagtaaagatgac
ataaaaaaggagttgttacttccagaacaagaaccaaacccctctacacaaaaaccttgt
gaaagagcagaaagagagaatactactacagaatgcagtgaccactcaacttctacagga
atgacttcatctttctgcaactatcaaacatttgaccagcgtgaacaacactacagatat
gtcaaacatgatgtgcttcctccagaaacagggatcgaaaacatgattgttccatgtcat
gaatataagtcactagagaatgcacacaaactagactcaaaaaggctacaaacaaaatta
gcaagtgaggtgttaagatttacatgtgcatgcatgaatatgcgaaccaatggaacaatt
cattttgggataatggataaaataagaggcaaacaccggcatggtgaaattataggaata
cctatctgcaatcgagaagatttcgtggatgcgttagactacattgaaaaatgcttcaaa
ggatcaagtcaacaatctgatgctaggaaatgcataagaaaccctcgattcattgaggta
attgacaaggaaactactgaaaaaacatgggtcattgaatatgatgttgtccccaaagca
agcactgtaaaagataaactttactatgttggtctcccaaaattctctgagaaggacaaa
aaagtcaaatgtgaagagaaagttccctatcacagagtgggagccaaaacaccccgcata
catgatgatgacttttttaatttcattaaaggactgacagagaaagaccaacaacgagag
gaggcagaatcttcaagcaatcaaacagctgttgactttaaagaggaccaaaagaggaaa
ctctccatcctcttaacatgtggaaaaacacacatggacaactctctgttttacatcatt
gtgagaaacaaatttcacccagagcatcttgacagcataggcttcttggttaacatgaat
ctattttgtgtgtttgattttgaccctgattcaaagacatcaggtctctgtgctagatat
aaggagcataagcctgcaacccctcgctttcttgatgactacgccatgaaaactgctgac
ttcataaattctttacagctttttgagagaacaagctggattttctgcaatggaagaaac
aacttccctggtggagaccaaacctgcgatgaaaaaacctggatcaaaacaagaaaaaag
aaactgaaaaaagcagtgtcggtcatctgcaatgaaatccttccgaggcattcatttgta
gtcctcttcttgctcatgtctgatgttgagcagcctcttgttgagacattccatgaattc
tatgcagagatgaatggaaatgattttttggcagtcgtatcagagtcgaaggaaaactac
aaaaagtggtcaagtcttgcacaggtgtcttgtgacatgtctacacttaaagagatcagc
attgttgaaatgccactgagtcatgtagatgccacagttcaaagcattcagctttcaaag
aatcaatccacaaggacattacccgtcttaaatggcggaagatgcttcttaaagtcagtt
gaagaggccttgctagattctttggaaatcatcagtgttgaccagtgtgatgatacaaaa
ctggagatcatgagtaaggatgaaatcgaacaaattgagagctacttctgtcaaggggga
aagatagactggatcaacttctggcttgctgacaaacacaagtgtggagatatcataaag
agggatgcctaccaagaagcatacaaaatcctggacaacatagcacagcataccaaagtc
atacgtcccatagaaagtgtgaacatataccaccaacctggtagtggtggaagcacagtg
gcacgacagatcctctggagttggaggacaaatgtacgatgtgcagttgttaaacagtgc
aaggaaatcacaactgtgtgtgatcatgccgtgagactgagggaacacgatgagagagac
caaaataactgtcttccagtactcctactgttggaagatcgtaatgcagattacatagat
gatctcagacaggagcttggaaatgtcattgcaaccaaaaaaatatgtcagtctgtggtg
tgcttcatcctgctcatctgcaacaggtcaaatgacccaggaaaaatgtgcagagcatcg
tcatctcaaacagtagcagtcacacatgagttgacaccggcagagaagcctttgttcaca
aaaaagcttgagcaactcaaacagcatattcatccagacttcatcctcacatttgtgctg
atgagtgaagagttcagtaaaagttacattaagggttttgtgaaaaacctttttgataac
attgatcattcatcacttttgactcgcctcatcagatttgtagctctcttaaattgctat
gtggaagattcatacatatctgtgtcacactgcgaagcatctcttggcatagctaccatt
gtggatagagctaaatatcatgcatttgtggatcatctctctgaagaagctaggcttctt
ttcatccaccttagagatgcttcaacacatatatcatcaatacggattattcacccacga
gtggcaaaggaaattttgcataagctgtctgcaaatttgcctcagagtgatattgccatg
gatctcatcaatgacaaggtacttatcaatcataggttcaacagagatgagttcctgaag
tttatcagagctcttttcatcaaacgcaacaaaaagagcagaggggattctaaagacaca
gctttttcaccccttattgagcatgtcagcaaaaacataggtgatgttcagaaagctgtt
gatctcttgaaagctgcttacctagctttaggaaaagatgcatacgtggcacaacaactt
gcccagctgctttacacaaagttgagatttgaagaggccctggaatgggcagaggaagca
aaatttcttcttccatatgatacattcgtccttgacacactgggacaagtttataagagg
tggttttaccacttgtatgacactcttgaagaaaaagaaccatcacctgaaaggggaact
gaaatcatacacattgcccttaaaggaatttctgccttcagggcctcagaaaaaactcca
aagaaagagactgttagccttaacagttcatactatggagaggtagatgtttgctgcagg
ctgctaaaattcctgtcaggtgttgatgttttttcaaacaatactgggaaatcagagttg
atgcagtacttgttaacagactacataccagcagaggtcaaaaaaccctggcagatgttt
catcagcagttgaaaggattacaaaagagtttgggtcatgcacttgagtgcatttctgaa
gacctcagctactttcaaactgatattagcgaggaggatgaagagcttgatgcaagggac
ccagaacaagtatataatcctagagaatggttgacaaggaagagtgctgtatatgctggc
tttttctgtattataccagatgagagtgtccaagcagctgaaagcaacagcactgacgtt
gctggtccagctaaaaagctttctgcattccaaagacagatgaagacctacaagctcggt
ggaggaaatgttacatccatcctctcattactttatgacaaggacccacagagagctgga
aaaaaacttgagacaataatcagcatgtacccagaaaacatgacatggaatgacctggac
cagacagagcttgcaaacttcatcttttgccaaatagctcttaactgtactctacctggg
tcctcaaagctcctgtcccttgaaaagcttcaagaactcagcaaaagatttattacaaag
gggaaaaacatgtcatcagcaagtgctctcttccttctctcccttcttttttggcctgag
actagcggtgaactcagttctgcaggtagtcggatccttttatcagccattgatgcactt
cagagaatctatgagcaaaaaatcaaacacgtgtctccaaggaaaagcagaatcgtgacc
cacttctttctggcaaaggcaaaaggtctcaacaagattgtccacagaattgcaattgaa
aagcagattaaaggcactctaagtgaaagaaagctgcaatggcttggaggggaagtatgg
aaaaacagggaagttgtgcagttactgaaacgtgttgaaggatggactgaaaatggaaac
ttaattgtcaaaggtggaaccaccgacagcaagattagggtctttcctcgatattctgcc
tccctgccaaatggaaatgaaaatgtcaccttctacttgggcttttcatttgatggagtg
gttgcctctgacatacaaataatggagtaa
DBGET
integrated database retrieval system
