Scomber scombrus (Atlantic mackerel): 134000052
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Entry
134000052 CDS
T10651
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00330
Arginine and proline metabolism
ssco00480
Glutathione metabolism
ssco01100
Metabolic pathways
ssco04148
Efferocytosis
Module
ssco_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
134000052
09106 Metabolism of other amino acids
00480 Glutathione metabolism
134000052
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134000052
Enzymes [BR:
ssco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
134000052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
134000052
NCBI-ProteinID:
XP_062295343
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All DBs
Position
18:complement(24349539..24356319)
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AA seq
479 aa
AA seq
DB search
MEKMEKNTDHASVTPNKAVMEVLSPENCDAVILDNGRTINNFIDNKIKELDSLTWRRSSA
VRMSMGIAHVRDFQLENLSNLFEPNWAFDNEPFYVANLDSVFERHHRWLTNLPRVKPFYA
VKCNNTPAVIQMLRTLDTGFDCASKGEIQMALSLGVTPDKIIYAHTTKPGFHIKYACAHG
VDLMTFDNEAELLKISQCHAKAKLILRIIVDDSKSLIRLSSKFGARLDTVEKLLERAKEL
GLEVIGVSFHVGSGCTDSLVFKQAISDARHVFDLANLLGFQMTLLDIGGGFSGREDFQVK
IEEFSEVINGALDKFFPPESGVQIIAEPGRYYVESAFTLVVNIIAKRVDMDHPDGEENSS
NKMVYYINDGVYGSLNCLINDPAHTSVTPYLHKAVDSSKQRYWSVIWGPTCDSLDKIIEN
YWIPELEVGDWLLIDNMGAYSVSITTTFNGFENAHIYPVVTAETWHALNLSHTNGIINE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatggagaagaacacagatcatgcatcagtaactccgaacaaagcagttatg
gaggttttgtcccctgagaactgtgacgctgtcattttagacaatggaaggaccatcaac
aatttcatagacaataaaataaaagagctagattcattgacttggagaaggtcttctgct
gtgcgaatgagcatgggcatagctcatgtgagggatttccagctggagaacctttcaaac
ctgtttgaacccaactgggcttttgacaatgaacccttctatgtggcaaatctagacagc
gtgtttgagagacaccacagatggcttaccaacttacctcgagtcaagcctttctatgca
gtgaaatgcaacaacacaccagcagttatccagatgctaagaactctggacacaggattt
gactgtgccagcaagggtgagattcagatggccctgtccctcggagtgacgcctgataaa
atcatttacgcacatacaacaaaaccagggttccacatcaaatatgcctgtgctcacgga
gtagacttgatgacttttgataatgaggctgaactcctaaaaatttctcagtgtcatgcc
aaagccaaactaattctccgcatcatagtggatgactccaaatccctgataagactcagt
tcaaagtttggtgccagactggatactgttgagaagctgctcgaacgagctaaagagctg
ggcttagaagtcattggagtcagcttccatgtagggagcgggtgcactgacagtttggtg
ttcaagcaggccatatcagatgcccgacatgtgtttgacctagcaaatttattgggcttc
caaatgacactactggatattggtggagggttttctgggagagaggacttccaagtgaaa
attgaagagttttcagaagttattaatggagcactggataaattcttcccacctgaaagt
ggagtgcagataattgcagaaccaggccgatactatgtggaatcagccttcacactggta
gtgaacatcattgccaaaagagtcgacatggatcatccagatggtgaagaaaacagctcc
aacaaaatggtctactacattaatgatggggtgtatggctccttgaattgcctcatcaac
gatcctgcccacaccagtgttacaccataccttcacaaggctgttgatagcagcaagcag
cgatactggtctgtcatctggggtccaacctgcgacagccttgacaaaataattgaaaac
tactggattcctgagctagaagtgggagactggcttctcatcgacaacatgggagcttac
tctgttagtataaccactaccttcaatggctttgaaaacgcacacatttatcctgttgtg
actgcagagacatggcatgccttaaacctttctcacaccaatggcattatcaatgaatga
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