Scomber scombrus (Atlantic mackerel): 134000094
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Entry
134000094 CDS
T10651
Name
(RefSeq) LOW QUALITY PROTEIN: ras-related protein ORAB-1-like
KO
K07874
Ras-related protein Rab-1A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134000094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000094
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
134000094
04031 GTP-binding proteins [BR:
ssco04031
]
134000094
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
134000094
Autophagy
Other autophagy associated proteins
134000094
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134000094
Exosomal proteins of other body fluids (saliva and urine)
134000094
Exosomal proteins of colorectal cancer cells
134000094
GTP-binding proteins [BR:
ssco04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
134000094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
AAA
FeoB_N
AAA_7
ABC_tran
PduV-EutP
AAA_16
Septin
LANC_like
AAA_29
AAA_22
AAA_5
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
134000094
NCBI-ProteinID:
XP_062295391
LinkDB
All DBs
Position
2:complement(34385915..34393493)
Genome browser
AA seq
202 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG
NKCDLTTKKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAN
SSEKSNVKIQSKPVNTSTGGCC
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaatatgattatttattcaagctgctcctgatcggtgactctggtgtcgga
aagtcttgtctcctcctccggtttgcagatgacacgtacacagagagctatatcagtacc
atcggagtggacttcaagatcaggaccatcgagctggacggaaagaccataaaacttcag
atttgggacacagccggtcaggaacggttccgcaccatcacgtccagttactacagagga
gctcacggcatcatagtggtttacgatgtgacagatcaggagtccttcaacaacgtcaaa
cagtggctacaggagatcgaccgctacgccagcgagaacgtcaacaagctgttagtagga
aacaagtgtgacctcacgacgaagaaggtcgtcgactacaccacagcgaaggagttcgca
gataacttgggcatcccgttcctggagacgagcgctaagagcgccaccaacgtggagcaa
gccttcatgaccatggcggccgagatcaagaagcggatgggacccggcgccacggccaac
tcctcggagaagtccaacgtcaagatccagagcaagccagtcaacacctcgaccggaggc
tgctgctga
DBGET
integrated database retrieval system
