Scomber scombrus (Atlantic mackerel): 134000192
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Entry
134000192 CDS
T10651
Symbol
smurf2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
ssco04137
Mitophagy - animal
ssco04144
Endocytosis
ssco04340
Hedgehog signaling pathway
ssco04350
TGF-beta signaling pathway
ssco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134000192 (smurf2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134000192 (smurf2)
04350 TGF-beta signaling pathway
134000192 (smurf2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134000192 (smurf2)
04137 Mitophagy - animal
134000192 (smurf2)
09144 Cellular community - eukaryotes
04520 Adherens junction
134000192 (smurf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000192 (smurf2)
04121 Ubiquitin system [BR:
ssco04121
]
134000192 (smurf2)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
134000192 (smurf2)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134000192 (smurf2)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134000192 (smurf2)
Autophagy
Mitophagy
Other mitophagy associated proteins
134000192 (smurf2)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
HECT type E3
134000192 (smurf2)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134000192 (smurf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
134000192
NCBI-ProteinID:
XP_062295513
LinkDB
All DBs
Position
18:complement(21601646..21651870)
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AA seq
773 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGCKYQRLDLN
KLSPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNH
ITRTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTIALPPSDGGDQRAQERRV
RSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNC
EELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRGVIESQN
VSRQNQLKDQAQQALVSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRI
EVSREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYG
LFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGK
PITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQ
DTKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDIH
DWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGP
RLFTIHQIDASTNNLPKAHTCFNRIDIPPYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcggaatggccctgtgaagctgcgactaacagtcctttgt
gccaaaaacctggtgaagaaggacttcttccgcctccctgatcccttcgctaaggtagtt
gtggacggttcagggcaatgccactctacagacactgtgaggaacacacttgaccccaag
tggaatcaacactatgacctatacattggaaaatcagattccatcactatcagtgtgtgg
aaccacaagaagattcacaagaagcaaggggctggcttcctgggctgtgtccgccttttg
tccaacgctatcaaccgccttaaagacaccggctgtaagtaccagagactagacttgaac
aagctgagtcccaatgacagtgacacagtcagaggccagatagtggtgagcttgcagtct
agggaccggataggcacaggaggccctgtggtggactgcagtcggctgtttgacaatgat
cttccagatggctgggaggagaggaggaccgcgtctggacgaatccagtacttgaaccac
atcacacgcaccacacagtgggagaggcctaccagacccgcatcagagtactccagcccc
ggccggcctctcagctgcatcgtggatgagaatacgccagtcagcacgaacggagccacg
cccaccatagcattgccgccgagcgacggtggtgaccagcgggcccaggagagacgcgtc
cgctcccagagacaccgcaactacatgagcagaacccacctgcacacgcccccagacctc
cccgagggatatgagcagaggaccacgcagcaaggccaagtgtacttcctccacactcag
acaggtgtcagcacgtggcacgaccccagagtacccagagatctgagtaatgtgaactgt
gaggaactgggtcctctccctcctggatgggagatacggaacacagccactgggagggtt
tactttgttgaccacaacaatcgaaccacgcagttcacagacccacgcctctctgccaat
ctgcatctagtcctaaatccaagccccaatggttctcgaggagtcatcgagagtcagaat
gtcagtcgtcagaaccagttgaaggatcaggcccagcaggctctggtgtcccctgctcag
ctcccagaggaggcagagtgcctcacagtgcccaaatacaagagagaccttgttcagaag
ctcaagattctccgccaagaactgtcccagcagcagcctcaggctggccactgccgcata
gaggtgtcccgtgaggagatctttgaggaatcgtatcgacaagtgatgaagatgaggccg
aaggacctgtggaaaaggctaatggtgaagttcagaggagaagaggggctggactacgga
ggagtggccagagagtggctctatctgctgtcgcacgagatgctgaacccgtactatggc
ttgttccagtactcccgcgatgacatctacaccctgcagattaatccggactctgctgtc
aaccctgagcacttgtcatactttcacttcgtgggccgtatcatggggatggcagtgttc
cacggccactacatagatggaggctttactttacccttctacaaacagctgctgggtaaa
cccatcaccctggacgacatggagtctgtagaccccgacctgcacaacagcctcgtctgg
atcctggacaatgacatcacaggtgtgctggaccacaccttctgcgtagaacacaacgcc
tacggagagatcattcagcatgagctcaagcccaatggcaagagcatccccgtcacccag
gacaccaagaaagaatacgtccggctctatgtcaactggcgtttcctgcgaggcattgag
gcccagttcctggctctgcagaagggcttcaatgaggtcatcccccaacacctgctcaag
gctttcgatgagaaggagcttgagctgattgtatgtggcctgggtaaaatcgacatccat
gactggaagtccaacacgcggctcaaacattgcactccagacagcaacatagttaaatgg
ttttggaaagctgtggagtccttcgacgaggagcgcagagcccggctgctgcagtttgtc
accggctcttccagggttcccctgcaaggcttcaaagccctccaaggtgctgctggccca
cgcctctttaccatccaccagattgatgccagcaccaacaacctgcccaaagcccacact
tgtttcaatcggattgacattcctccctacgagcactacgacaaactgtacgacaagttg
ctcactgccatcgaggagacgtgtggttttgccgtggagtga
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