Scomber scombrus (Atlantic mackerel): 134000193
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Entry
134000193 CDS
T10651
Symbol
pex6
Name
(RefSeq) peroxisomal ATPase PEX6
KO
K13339
peroxin-6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
134000193 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000193 (pex6)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
134000193 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_33
TIP49
RuvB_N
AAA_22
DUF815
AAA_5
NPHP3_N
TsaE
PEX6_4th
nSTAND3
ABC_tran
RNA_helicase
AAA_7
Mg_chelatase
AAA_25
AAA_18
AAA_29
AAA_24
AAA_28
Vps4_C
AAA_14
Parvo_NS1
AAA_17
IstB_IS21
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
134000193
NCBI-ProteinID:
XP_062295518
LinkDB
All DBs
Position
2:36071647..36087322
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AA seq
1068 aa
AA seq
DB search
MAVQVELCCVDTFPPHLSPLDGLLSPSHLASLFQDDSEPPTVLFTPQRPHSSGTPGILLR
VHPASEHDPPADPEPGGRLRLLTSRLFLRLHGLQRLGSTGTVRAVRPVSLQRVVLGARSR
QSLRWAAAERFTGGLLELCSPGQWLLARQGDPLLLPGQLQQSDLLVLDCSPVIQGRITAD
TSLVVTDCCDWPEPQSSAPPCRPLRLCVSDFAHYADGLGGAGGGGGGRSLLDNRKLLGSG
FSGVLQALECRVDVRVVDAQRWMGVRGQQGGGVSGQQGGGVRGQQGGGVDVDNCVFVSKQ
LLLRLGLFNQEWVKLSRPGGACRPPPPGHCDVRGGGGGRERLVSVVTVDLSLSPDLQIHD
EAGFISETLWFNLTDGEETSTGACSLRVKRWQQTQQLDARRSDSFCRSASPPVAMELHIQ
PVMSPLYSSLGCYDNLLADHFNTPRLVSVGDVLTVPAGNHPDLLQSSEGINRCPVLFFRV
QQVRPSAETEEEEEEERGALLADRLHTSLYLGGSTSSRVPCCSVEGTSLWDSLSPPGLSG
TVDLLSSIIRPHLQPSSSLAGCTVLLHGPAGSGKVTLVSAASRRLHLHLLKVDCVTVCAD
TPAAAEVKLTSVFQRADALQPCVLLLRNLQVLLRPRGGADEDGRVQAALCKLLSGAASSV
VVVATVCRPRELSGGIMAAFVHQVAIESPNEEQRHAMLLSLSREVQLGRDVNLERLSKLT
AGLVLGDLRALLVQAGRAACRRLIQTCAGSVEEDLCSSGVSVLNQDFTSALETLQDAQSK
SIGAPKISQVRWEDIGGLQQVKKEILDTIQLPLQRPELLSLGLSRTGVLLYGPPGTGKTL
LAKAVATECSMTFLSVKGPELINMYVGQSEENIREVFSRARSAAPCVVFFDELDSLAPSR
GRSGDSGGVMDRVVSQLLAELDALHSAASVFVIGATNRPDLLDQSLLRPGRFDKLVYVGV
NEDRASQLQVLQAVLRKFQLDSTVKLQDLVQRCPSHMTGADLYALCSDAMTTAVKRKICL
IEQGLDSEDSPVCLSDEDFSAALENFKPSVSADELLRYRNIQQRLTAA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaggtggagctgtgttgtgtggatactttcccccctcacctgagccctctg
gacgggctgctgtcaccgtctcacctggcctcgctgttccaggatgactcggaaccaccg
accgtcctcttcaccccgcagcggcctcacagcagcgggacaccgggcatcctgctgcgt
gtccacccggccagcgagcatgatcccccggctgacccggagcccggtggccgcctccgg
ttgctcaccagccggctgttcctgcggctgcacggcctgcagcggctcggcagcaccggg
acggtccgggccgtgaggccggtcagcctgcagcgggttgtgctgggagcccgcagccgg
cagagcctccgctgggccgcagctgagcggttcaccggcgggctgctggagctctgcagc
ccgggacagtggctcctggcccggcagggagacccgctgctgctgcccggacagctgcag
cagtcggacctgctggttctggactgcagtcccgtgattcagggtcggatcaccgccgac
acgtctctggttgtgacggactgctgtgattggccggagccacagagctccgcccccccc
tgcaggccgctcagactctgcgtgtcggacttcgctcactacgccgacggcctcgggggg
gcaggaggggggggaggggggcgctcgctgctggacaacaggaagctgctgggatcgggc
ttctcgggggtcctgcaggcgctggagtgccgggtggacgtccgcgtggtggacgcacag
cggtggatgggggtcagaggtcagcagggcgggggggtcagcggtcagcagggcgggggg
gtcagaggtcagcagggcgggggggtggatgtggataactgcgtgtttgtgagtaaacag
ctgctgctcagactcggcctgtttaaccaggagtgggtgaagctgtcccggccggggggg
gcctgcagaccgcctccgccgggtcactgtgatgtcagaggggggggcggcggcagagag
aggctcgtctccgtggtgacggtggatttaagtctgagtccagatctgcagattcacgac
gaggccggtttcatatcagagactctgtggttcaacctgactgacggagaagagacgagt
actggagcctgcagcctcagggtcaagcgatggcagcagactcagcagctcgacgctcgt
cgctccgacagtttctgccgctctgcgtctccgcccgttgccatggagcttcacatccag
ccggtgatgtcgccgctgtacagcagcctcggttgctatgacaacctgctggccgatcac
ttcaacacgccgagactggtttcagtgggagacgtcctcacagtcccagctggaaaccat
ccggacctgctgcagagctcagagggaataaacaggtgtccagtgctgttcttcagagtg
cagcaggtacgaccgtctgcagagacagaagaagaagaagaagaagagagaggagcgctg
ctggccgacagactgcacacctcactatacctgggaggttctaccagcagtcgggttccc
tgctgctccgtggagggaacgtctctgtgggacagtttgtctcctccaggactcagcggg
acggtcgacctgctcagcagcatcatccggcctcacctgcagcccagcagctctctggcc
ggttgcaccgtcctccttcacggtccggcaggaagcgggaaagtgacgttggtcagcgca
gcgagccgcagactccacctccacctgctgaaggtggactgtgtgacggtttgtgccgac
acccccgccgccgctgaggtgaagctgacttcggtgtttcagcgagcagacgccctgcag
ccctgcgtcctgctgctcaggaacctgcaggtgctgctgcggcctcgggggggcgccgac
gaagacggccgggtccaggcggcgctctgcaagctgctcagtggcgccgccagcagcgtg
gtcgtcgtggcgaccgtctgccggcctcgggagctgtccggaggcatcatggcggcgttc
gtccaccaggtggcgatagagagtccgaacgaggagcagcgtcacgccatgctgctcagt
ctgagccgagaggttcagctcggcagagacgtgaacttggagcggctctctaaactcacc
gcgggtctggttctgggggatctgagggctctgctggttcaggctggccgagccgcctgc
aggaggctgatccagacctgtgctggatctgtggaggaggatctgtgttccagcggagtc
tcggtcctgaaccaggacttcacctcggctctggagactctgcaggacgctcagtccaaa
tccatcggagctccgaagatatctcaggtgaggtgggaagacatcggaggtcttcagcag
gtgaagaaagaaatcctggacacgatccagcttcctctgcagcgtccggagcttctgtct
ctgggtctgagccggaccggagttctgctgtacggacctccaggaaccgggaagactctg
ctggctaaagccgtcgccaccgagtgctccatgaccttcctcagtgttaaaggtccagag
ctcatcaacatgtacgttggtcagagtgaagaaaacatcagagaagtgttcagcagagct
cgctcagcggctccgtgcgtcgtgttcttcgatgagctcgactcgttggcgcccagcagg
gggcgcagcggcgactccggaggcgtgatggacagagtcgtgtctcagctgctggccgag
ctggacgcgctgcactcagccgccagcgtgtttgtgatcggagccacgaaccgaccggac
ctgctcgaccaatcactgctgaggcccggcaggtttgataaactcgtctacgtcggcgtt
aacgaggatcgagcgtctcagctgcaggttctccaggccgtgctcaggaagttccagttg
gactcgacggtgaagctgcaggatctggtgcagcgatgtccgtcacacatgaccggcgcc
gacctgtacgcgctctgctccgacgccatgacgaccgccgtcaagaggaagatctgcctc
atcgagcaaggtttggactctgaagattctcccgtttgtctctctgatgaagatttctcg
gcagcgttagaaaactttaaaccttcagtttcagctgatgagcttctgagatacagaaac
atccaacagagactcacagcagcttaa
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