Scomber scombrus (Atlantic mackerel): 134000221
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Entry
134000221 CDS
T10651
Symbol
samd9l
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like isoform X1
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000221 (samd9l)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Others
Others
134000221 (samd9l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
TPR_19
SAM_PNT
SAM_KIDINS220
DMAP1_like
FGF-BP1
Motif
Other DBs
NCBI-GeneID:
134000221
NCBI-ProteinID:
XP_062295543
LinkDB
All DBs
Position
18:15180213..15188913
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AA seq
1547 aa
AA seq
DB search
MTDKLEQSPKNWTESQVSTWLSSIGVKEQYIEKLYEEEVDGQILLALNEDFLKTKICMKS
GPAHLIIQKRDELINSQQKSQEKKKPTGSKQTEVEQKNVKQKSVQCQPTTCESPTTQIPE
RDQDALEERQKAKEQCVLTSKEDCKPRPFDQEGIDFLYVKHRVLQPESGAFNLTSPCHEF
KSFALAATLDRTRLQAKFAKEVLKFATGCMNIRSNGTVHFGVMDSKEDAGYVHGEIVGIP
VNEKDVYVDALDYIERSFSTDKEHLRQCVRPPRFIEVMDRDSTEKKYVVEVDIVPSISIV
KSKVYAVRLPNFKETTNKVEFEKESILRRVGSKTEPVSDKDQSDFYQRVKDRDAQREEAE
KCQFLWAPEICQDLGRKLTMLMTSGKKFMEKDKWFILVTNKFKPDDLCNIDWLLNMNIFC
VFDFDPDSKISGLCSRYLQHHAANMHFLQSYKISSDTSIKEFTSNLHLFEQTSWIFCNGR
TDFQGNETPCDEMTWIKTKMTLLRESVSLICKQILPKGTFQVLFLLTSTVEKPLLHTFYE
FFTDMEGHEDITCICESKINFQKWQSFAEGSCGPETVNNSSVVGMKMSHINATLQQVQPI
KASARKHLPVFVKGTCLLETLKEEQMYSLEILTVDHCDETSEDFINEEKESIERQFYRGG
RVTWLNFWLAEHKYVGEVIDRDAYHDVSKLLDDALKWNADQTPVNSINIYHHPGSGGSTV
ARQVLWNNRKDLRCAVVKPSYSVAVVAQHAVELREYEEKDPQRCLPVLLLIEDSDKEYLG
DLRNELEVAINVKRIQYGTLCFILLSCRRSHDPERRCKESPLQNVSVTHKLSDQEKRKFA
GKRQVLEKKYEPQFILTFVLMSEGFTKKYVEEFVEHLLQGIDHHSAVTRLIHYVALLNTY
VQNSFISQSHCEALLALTIHLERFRQHEFERSLSDQAKLVFLHLRDEMTHIESIRIIHPL
VAEEILKQLLGNQKTHSSLAMNLLCETVLFEHRFGRDEYLSFLRALFLRRSRISKGDEYD
SFFSPLIEHVCENEKSPGKAIELLIEAFQRFHKDPFFAQQLARLHYTYEKFEEAKCWAET
AAKQLPNNSYILDTKGQVYRKWFQAKCKAIDNDNVPKTAQNIAHAVETALKALECFQECE
KAANADMDNVNSSGFFSEVEVGCSLLKLISSLQVFANRGNGHAECMKYLLTDYIPEEVEE
AWQPFHGHLKRLHKTMQDALEWISEDLSYFQTDIGVDEEETPERPEEKISHPLKWLAKKS
SEYGKYFSEAYSTALQQHGQSIPANLTPFQKRMIIYYLGGGNITTILSKLTDHKDAVHLL
ESILSLYPSNPVKAKFVQRDIANYIVAHIILNCLSPQSPKVAPLKDLQALCHQFPTDKRK
CLPSSLFLLTLLFWPEDHDTDHEKETKYETVQSAVEHLERDYWTKMKDIPQRKRRLYTHF
FLGSGNGLDKFVHKRKFEKITKVFSVSEKRMKWFSGEAWKMPEISRMLKRVSGWTEDGVV
YLQGPQKKKFNILPLYVPSVPHSNENITFYLGFTFRGPVACNILVKK
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgacggataaacttgagcagtcacccaagaattggactgaatcacaagtaagcacctgg
ttaagctctattggagtgaaggaacagtatatagagaaactctatgaggaagaagtagat
ggacaaatccttcttgcactaaatgaggactttttgaagacaaagatttgcatgaaatcg
gggcctgctcatttaattattcaaaaaagagatgagctcatcaactcccaacaaaagtct
caggaaaagaaaaagcctactggcagcaaacaaactgaggtggagcagaaaaacgtcaag
cagaaatcagttcagtgtcaacctacaacatgtgaaagtcccacaacacagattcctgaa
agagatcaagatgccttagaggagagacagaaagctaaagaacaatgtgtgctgacttca
aaggaagactgcaaaccacgaccatttgatcaagaaggcattgactttctatatgtaaag
cacagggtcctgcagcctgaatcaggggcttttaatctgacatctccatgccatgaattt
aagtcttttgctttagcagcaacattggatcgtacaagactacaagctaaatttgccaaa
gaggttcttaaatttgccactggctgtatgaatatcagatcaaatggcacagtacacttt
ggtgtgatggacagcaaggaggatgcaggatatgtgcatggtgaaatagttggtatccct
gtaaatgagaaagacgtctatgtagatgctttggactacattgagaggagtttctccacc
gacaaagagcatttacgtcagtgtgtgcggccaccaaggttcattgaggtgatggatcga
gacagtacagaaaagaagtatgtggtagaggttgacattgtgccttcaataagtattgtt
aagagcaaggtttatgcagttcgtttgccaaacttcaaagagacaaccaacaaagtagag
tttgagaaagaatctattttgcggagggtgggttcaaaaacagagccagtgagtgacaaa
gaccaaagtgatttttaccagcgggtcaaagatcgggatgctcaaagagaagaagcagag
aaatgccagtttctctgggctccagagatctgccaagaccttggaagaaaacttacaatg
ctgatgactagtggaaagaaattcatggaaaaggataagtggttcatacttgtcacaaac
aaattcaaacctgacgacctctgcaacattgactggctgcttaacatgaacatcttctgt
gtgtttgactttgacccagactcaaagatatcaggtctttgcagtagataccttcagcat
catgctgcaaacatgcattttttgcagagctataagatatccagtgacacaagcatcaaa
gaattcacaagcaacttgcatctgtttgagcaaactagctggatcttttgtaatggtcgt
actgacttccaaggaaatgaaactccatgtgatgaaatgacttggatcaaaacaaaaatg
actctcctgagggaatctgtgtctttgatctgcaaacaaatcttgcctaaagggacattc
caggtccttttccttcttacgtcaacagttgagaaaccactcttgcacaccttttatgag
tttttcacagacatggaaggccatgaagacatcacctgcatctgtgaatcaaagattaac
tttcagaaatggcaaagctttgcagagggttcatgtggaccagaaaccgtgaataattcc
agtgttgttgggatgaaaatgagtcacattaatgcaactctgcagcaagtacaaccaata
aaagcatctgcaagaaaacacttgccagtctttgtgaaagggacttgtcttcttgaaaca
ctcaaagaggaacagatgtattctctggaaattttgactgttgatcattgtgatgaaaca
agcgaagacttcatcaatgaggaaaaagaaagcattgaacgccagttctaccgtggaggg
agagtgacatggttgaatttctggcttgctgaacacaaatatgttggagaggttattgac
agagatgcttatcatgatgtttccaaacttctcgatgatgctttgaaatggaatgcagat
cagactccggtcaatagtataaacatctaccaccatcctggaagtggtggaagcactgtg
gcaagacaagtgctttggaacaacaggaaagatctaaggtgtgcggttgtgaagccttca
tactcagttgctgtagttgcacaacatgcagttgaactaagagaatatgaagaaaaagat
ccacagaggtgtcttcctgtgctgctcctcattgaagactctgacaaagaatatctaggt
gatctcaggaatgaactagaggttgccatcaacgtcaaaagaatccagtatggaactcta
tgtttcattctgctgagctgcagacgatcccatgatccagagagaagatgcaaggagtct
ccattacagaatgtgtctgtcactcacaaactgtctgatcaagagaaaagaaagtttgct
ggaaaacgacaagtgcttgagaaaaaatatgagccacaattcatcctgacatttgttttg
atgagtgaaggattcactaagaagtatgttgaagagtttgtggaacatttgctgcaaggc
attgaccatcattctgctgtgactcgcctcattcactatgtagcactgctgaacacttat
gttcaaaactctttcatctctcagtcacattgtgaagctttgcttgccttaaccattcac
ttggaaaggtttcggcagcacgagtttgagagatcactcagtgatcaggctaaactagtc
ttcttgcaccttagagatgagatgacgcacattgagtcaatcagaatcattcacccactc
gttgcagaggaaattctcaaacaacttctgggtaaccaaaagacccatagcagtttggca
atgaatttactctgcgagactgtgcttttcgagcacagatttggaagggatgaatacctt
tcatttttgagggcacttttccttaggcgatccagaataagcaaaggagacgaatatgac
agttttttctctcctctgattgaacatgtgtgtgaaaatgagaaaagcccagggaaagca
attgagttactgatagaagcgttccagcgtttccataaagatccgttctttgcacagcaa
cttgctcgtcttcattatacttatgaaaagtttgaagaggcaaaatgctgggcagagaca
gctgctaagcagctgcccaacaactcatacatactggacacaaaaggacaggtgtacaga
aaatggttccaagcaaaatgcaaagctattgacaatgacaatgtaccaaagacagcccaa
aatatagcccatgctgtggagactgcactgaaagccctggagtgttttcaagagtgtgag
aaagcagctaatgcagatatggacaatgttaacagttcagggtttttttctgaggttgag
gttgggtgcagcctgctcaaactgatctcttcattgcaagtgtttgcaaacagaggcaat
ggccatgcagagtgtatgaagtacctgttaacagattacattcctgaagaagttgaagaa
gcctggcaaccatttcatggccatttgaaaagacttcacaagacaatgcaagatgccttg
gaatggatttcagaagacctcagttacttccaaacagacattggggtagatgaagaggaa
acccctgaaaggcctgaggagaagataagccacccactaaaatggttggcaaagaaatct
tcagagtatgggaagtacttcagtgaagcttattctactgcacttcaacaacacgggcaa
tcgatcccagccaatttaactccttttcaaaaacgcatgatcatatattatcttggcgga
ggtaacatcacaaccatcctctcaaagctgactgaccataaggatgcagtacatcttcta
gagagcatcctttctctctaccccagcaatccagtgaaggccaaatttgttcaaagggat
attgccaactacatcgtggcccacattattctgaactgcctgtcacctcagtctccaaaa
gttgctcccctgaaagatctacaggcgctgtgtcatcagttcccaactgataaaaggaaa
tgtttaccaagttccctgttcttgcttacattgctgttttggccagaggatcatgacaca
gaccatgagaaagaaacaaaatatgaaactgtgcagtctgctgttgaacacttggaaaga
gactactggaccaagatgaaggacattcctcagcggaagagaaggctttacacccatttt
tttctgggcagtggaaatggattggataaatttgtccacaagagaaagtttgaaaaaatc
actaaggtgttctcagtctctgagaaacgcatgaaatggtttagcggtgaggcatggaag
atgcctgagatttcccggatgctgaaacgtgtttctggatggactgaagatggagtggtt
taccttcagggacctcagaagaagaagttcaatattctgcctctttatgtaccttcagtg
cctcatagcaatgaaaacatcacgttctacttgggatttacctttagaggccctgttgcc
tgcaacatccttgtgaaaaaatag
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integrated database retrieval system
