Scomber scombrus (Atlantic mackerel): 134000238
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Entry
134000238 CDS
T10651
Symbol
vps37a
Name
(RefSeq) vacuolar protein sorting-associated protein 37A isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134000238 (vps37a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000238 (vps37a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
134000238 (vps37a)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
134000238 (vps37a)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134000238 (vps37a)
Exosomal proteins of colorectal cancer cells
134000238 (vps37a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mod_r
UEV
DUF4349
Motif
Other DBs
NCBI-GeneID:
134000238
NCBI-ProteinID:
XP_062295567
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All DBs
Position
2:12571970..12581876
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AA seq
393 aa
AA seq
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MNWLFPLSKGSGPLPPLNSLQQQRQRQIESLKAAHPSLAEIQKDVEYRIPFTVNNSTISV
NILLPPQFPQEKPVVSVYPPVGHHLVDSNNGTMITSPLISNFGMHSDLGKVIQSLLDEFW
KSPPALMSTGSSGFPYGMYKPSGMAPYPTQAFHYGPRHVGPSQTPPPAPSQAPAPMSHPG
VDSVHGPPRAPAPYGLITDLPLPVPTGDSQAGLNGHMYKMPEIPESFPELCDSNLTQLSD
MSENEDVLLEFFVSLPQLKQVTNDKEELVTSIVDMAKKNLQMEPQLEGKRQEMLYKYEQL
TQMKSAFETKMQRQHELSESCSLSTLQARLKVAAHQAEEESEETAENFLEGRTDIDEFLT
SFMEKRTLCHSRRAKEEKLQQSINTHEQFPTSH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcttttccccctttccaaaggctccggacctctccctcctctcaacagcctc
cagcaacaaagacagcggcagatcgagtctctgaaggcggctcaccccagccttgcagag
atccagaaggatgttgagtaccggataccattcacagtcaacaactccaccattagtgtt
aacattctgctgcctccccagtttcctcaggagaagccggtggtcagtgtctacccccct
gttggtcaccatttagtcgacagcaataatggtaccatgatcacaagccctctcatcagt
aattttgggatgcactcagatctgggtaaggtcattcagagtctgctggatgagttctgg
aagagtcctcctgccttgatgtctactggttcctctggctttccatacggtatgtacaag
ccatcaggcatggctccttacccaactcaggcgttccactatggtcctcgccatgtgggc
ccaagtcagacgccgcccccggctccttctcaagctccagctccaatgtctcacccaggt
gtcgatagtgtccatgggcctcctcgagccccagccccatacggactcattactgacctt
ccactgcctgtaccaactggagactcacaggctggacttaatggacacatgtacaagatg
cctgagattcctgagtcttttcctgagctctgtgactcaaatctgacccagttgtcagat
atgtctgaaaatgaggatgtgttactggagttctttgtgagtttgccacaactcaaacag
gtcaccaatgataaagaagagctggtcaccagcatagtggatatggctaagaaaaacctt
cagatggagccacagctggaaggaaaaagacaagaaatgctttacaagtacgaacagctg
actcagatgaagtcagcctttgagacaaagatgcaaagacaacatgaactcagtgagagt
tgcagtcttagtactctgcaggctcggttgaaggttgcagcgcatcaggctgaggaggag
tcagaggagacagctgaaaacttcctggaaggacgtactgatatagacgaattcctgacc
agtttcatggaaaagagaacgctttgccacagccgaagggccaaagaggagaagttgcaa
cagtccatcaatacacatgaacagtttcctaccagccactag
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