Scomber scombrus (Atlantic mackerel): 134000244
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Entry
134000244 CDS
T10651
Symbol
clec16a
Name
(RefSeq) protein CLEC16A
KO
K19513
protein CLEC16A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000244 (clec16a)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
134000244 (clec16a)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
134000244 (clec16a)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
134000244 (clec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
DUF6136
Motif
Other DBs
NCBI-GeneID:
134000244
NCBI-ProteinID:
XP_062295572
LinkDB
All DBs
Position
18:19103852..19151869
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AA seq
1165 aa
AA seq
DB search
MFGRSRSWVGGQGRTKNIHSLDHLKYMYHVLTKNTTVTDHNRNLLVETIRSITEILIWGD
QNDSSVFDFFLEKNMFAFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNNH
VNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHP
ESMVRIAVRTITLNVYKVSLDNQHMLHYIRDKTAVPYFSNLVWFIGSHVIELDKCVQTDE
EHKNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLVIPETS
EERKINPQVSLYLLSQVFLIIHYKPLVNSLAEVILNGDLSVFTLPTDMHSTHKNTASAGG
VRRFTKPLESLERSLELSRHRGRKRTQKRPNYKNLGEEEDDERAGGGGGGGSGGGEEGWD
DDGRGGEGGREREKGKGTEGVGGGGGGSSKGSRASGETAEEIEMVVMEKCKVSELTEQNI
TDEEKTAAATRTHTQRSRPFLDMVYSALDCTTDDYHALFVLCLLYAVSHSKGINCDLLER
LQLPVPEQERSSYSLVLAERLIRVMSQAAQPDGKVRLATLELTCLLLKQSVLSGNHCIIK
DVHLACLEGAREESLHLLRRFYKGKQSFLDMFEDEYRSMTSKPLNVEYLMMDASILLPPT
GTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLRSLSLQLQGEPETQLPLTRPEDLIKTDDV
LDLNNSDLIACMVVSKDGGQAQRFLAVDVYQMSLVEPETKRLGWGVVKFAGLLQDMQVSG
VEDDSRALNIVIHKPSSNPHAKPLPILQANFIFADHIRCIIAKQRLAKGRIQARRMKMQR
IAALLDLPVQPSATEVLGFGQTTNASPSGLPFRFYEQSRRAPNDPTANRSVFASVDKVPG
FAVAHCVSQHSPSPLSSPSPPSSGSGSTGRCDSVTASTISAQSPTDDGTFLEHTPPSSSG
GEGEGGGGEVTLVSSAFSTPAPAQALAPSLTPASQPTISLLTDSDGDALSVESLTLLPPS
DSPHLHPCTSHIPATLQRPDAAIPEEEEDNDEEKEVRKEEERAGEELKEEEVSPTDKTET
DATLKEETTTTELVTPTEEAPEESEGGEAAEDKESVDKDTPLGQHRDLSSAALLKERDDS
TATESVEKTEDTEIHTETPESPELD
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgttcggccgttcacggagctgggttggaggacaggggagaacgaaaaatatccactcc
ttggaccatttgaagtatatgtaccatgtcttgaccaaaaacacaacagtcacagaccac
aaccgaaacctactggtggagaccatccgctccatcacagagatcctcatctggggggac
cagaatgacagctctgtgtttgacttctttcttgagaagaacatgttcgccttcttcctg
aacatcctacgtcagaagtccgggcgctacgtgtgtgtccagctcctccagaccctcaat
atcctgtttgagaacatcagccatgaaacctctctctattacctcttgtcgaacaaccat
gtgaactccatcatcgtccacaagtttgacttctcggacgaggagattatggcttactac
atctccttcctcaagaccctgtcactgaaactcaacaatcacacagtgcacttcttctac
aatgagcacactaatgactttgccctgtacaccgaggccattaagtttttcaaccaccct
gaaagcatggtccgcatcgcagtccgcaccatcacactcaacgtctacaaagtttcattg
gacaaccagcacatgctgcactacatccgagataagacagcagtgccatatttcagcaac
ttggtctggtttattggcagccatgtcatcgaactggacaagtgtgtgcagacagatgaa
gagcataagaacagagggaagttaagtgacctggtggcggagcaccttgaccaccttcac
tacctgaacgacatcctcatcatcaactgtgaattccttaacgacgtgttgaccgaccac
ctcctcaaccgcctgttccttcccctctacgtctactctttggtcatccctgaaacctct
gaagagcgaaagatcaaccctcaggtgtccctctacctgctgtcccaagtgtttctcatc
atccattataagccactggtcaactccctggctgaagttattctcaatggggacctatct
gtcttcaccctgccgacagacatgcacagcacgcacaagaacacggccagtgcgggaggc
gtgcgtcggttcactaagcccctagagtccctagaacgctctctggagctgtcccgccac
cgcggccgcaagagaacccagaagaggccaaactacaagaacctgggcgaggaagaggat
gacgaaagagctggtggagggggaggaggcggcagcggaggaggagaggagggctgggac
gacgacggcaggggaggagagggaggccgagagagggagaagggaaaaggtacagaggga
gtaggaggaggaggaggtgggagttctaagggaagcagagcgagtggtgagacggcggaa
gagattgagatggtggtgatggagaagtgtaaggtgtcagagctgacggagcagaacatc
actgatgaggagaagactgcagcagccacccgcacacacacgcagaggagcagaccgttc
ttagacatggtgtacagtgccctggactgcaccactgatgactaccatgctctgtttgtc
ctgtgcctgctctatgctgtctctcacagcaaaggtataaactgtgatcttcttgagcgg
ctgcagctgccagtcccagagcaggagaggagctcctacagtttggtgctggcagagaga
ttgatcagagttatgagtcaggcagcacagccagatggtaaagtgcgtctagctaccctg
gagctgacttgccttttattaaagcagtctgtgctgtctggaaaccactgtataatcaaa
gatgtccacctggcctgcctggagggtgccagagaagaaagtctacatttactgcggaga
ttctataagggtaaacaatcttttctggacatgtttgaagatgaatacaggagcatgacg
agtaaaccgctcaatgttgagtatctaatgatggatgcttcaatactgctgccacccacc
ggcaccccgctgacgggcatcgactttgtcaagaggctgccttgtggagacgtggagaag
acacgcagggcaatccgcgtgttcttcatgttgcggtcattatcgctccagctgcaggga
gaacctgagacacagctgcctctgaccagacctgaggacctaatcaagactgatgatgtc
ttagacctcaataacagtgacctaatagcttgtatggtagtcagtaaagatggcggccag
gcccaaaggttcctcgctgtggatgtctaccagatgagtctggtcgaaccagaaaccaaa
cgtctcggatggggtgtagtcaagtttgctggcctattgcaagacatgcaggtgtccggt
gttgaagacgacagcagagcgttgaacatcgtcatccataagcccagctccaatccccac
gccaagcccctgcccatcctgcaggccaacttcatcttcgccgaccacatccgctgcatc
atcgccaagcagaggctggccaaaggtcgcatccaggcccggcgcatgaagatgcagagg
atcgcagctctgttggacctgcctgtgcagcccagtgcgacggaggtgttgggtttcggt
cagacaaccaacgcttcacccagcggcctgcctttccgattctacgagcagtcaagacgg
gcccccaacgaccccactgcaaacagatcagtctttgcctccgtggataaagtaccaggt
tttgcggtggctcactgtgtgtcgcagcacagtccctctcccctctcctccccctcgcct
ccctccagtgggagtgggagcacaggaagatgtgactctgttactgcaagcactatatca
gctcagagccccacagatgatggcacatttttggagcacacccctccctcctcctcaggt
ggagaaggcgaaggaggaggaggggaagtaacgctggtctcctccgctttctcgacccca
gctccagctcaggctctggccccaagcctcaccccggcctcccagcccaccatctccctc
ctcaccgacagcgatggcgatgccctcagtgtggagtcgctcacgctgctgcccccttcc
gactcgccgcacctgcacccctgcaccagccacattcctgcaacccttcagagaccggac
gccgccatccctgaagaggaagaggacaacgatgaggagaaagaagttaggaaagaagaa
gaaagggcaggggaagagctaaaagaggaggaggtgtctccgacagataagacggagaca
gacgcgacgctaaaagaggaaaccacaacgacggagttggtcacacccactgaggaggca
ccagaagaatcagagggaggtgaggcggcagaggataaagagtctgtagataaggacact
cctctggggcaacatagagacctgtcctctgccgcactgctgaaagaaagagacgactca
acagctacagagtctgtagagaaaacagaagatacagagatacacactgaaacaccagaa
tcacctgagctggactaa
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integrated database retrieval system
