Scomber scombrus (Atlantic mackerel): 134000267
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Entry
134000267 CDS
T10651
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03320
PPAR signaling pathway
ssco04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
134000267 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
134000267 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssco01004
]
134000267 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
134000267 (slc27a1a)
Lipid biosynthesis proteins [BR:
ssco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
134000267 (slc27a1a)
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
134000267 (slc27a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
134000267
NCBI-ProteinID:
XP_062295612
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All DBs
Position
18:complement(11777387..11784081)
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AA seq
648 aa
AA seq
DB search
MHNVASVSASLGSMGLLRLFGVSWSWSLAAGLGVYLGTRTWKYFYIAARTAKRDLNGLYV
LLRVKMALWRYVRNGSNIPSIFAQTVKLHPNKVALIYEATGETWTFTQLDELSNAVAHWA
RGQGWVSGDVVALFMESRPSQVALWLGLAKVGVEAALINFNLRHDSLLHCIGASGSRAIV
FGAELADAMSEVTSSSSQSMVRFCTGELSAERLACLGAQPLDPILASESKHPPSACVPPK
GMNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYYAFRMRSDDVIYDCLPLYHSAGNI
MGVGQCLIHGLTVVVKRKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSEKGHKV
RLAVGNGLRPSVWEAFTERFRVAQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
IRLVRVDEDSMELVRDSRGLCVPCRPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIAH
NVFKKNDSAYLSGDVLVMDDLGYMYFRDRGGDTFRWRGENVSTTEVEGILSSLLGQTDVA
VYGVAVPGVEGKAGMAAIADTAGSFDSNGFLQMVQGALPSYARPVFLRISPHVDTTGTFK
IQKTRLQREGYDPRLTTDQIYFLNSRAASYEAVDEELYNAIEEGRMSL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgtggcaagtgtctcagcctctcttggatcgatgggactcctgcgtctcttc
ggagtgtcctggtcctggagtctggcagcaggcctcggggtgtatctgggcacaagaacc
tggaaatacttctacatcgcagcacgcactgccaagagagacctcaatggcctctatgtg
ctgctgagagtaaagatggctttatggcgttatgtgcgcaacggaagcaacattccttcc
atctttgcccagactgtaaaactccacccaaacaaagtagccctgatctatgaagcaaca
ggggaaacatggaccttcacccagttggatgagctgtctaacgctgtcgcccattgggca
agaggtcaaggatgggtctccggggacgttgtggccctcttcatggaaagcaggccctca
caagtggcgctttggttgggcttggccaaagttggggtggaagctgcactcatcaatttc
aacctccgccatgattccctcctgcactgtatcggggcgtcagggtcccgggctattgtg
tttggagctgagcttgctgatgcaatgtctgaagtaacttcctccagcagccagtccatg
gtaaggttttgtacaggagagcttagtgcagaacgtctggcatgtctgggtgctcaacct
ctggatccaattttagcctctgaatctaaacatcccccctcagcttgtgtcccccccaaa
ggcatgaacgaccgtctattttatatttacacctctggcaccacaggacttcctaaggct
gccattgtggtacacagtcgctactacagaattgccgcttttggttattatgcctttcgc
atgcgctctgatgatgtcatttatgactgtctccctctctatcactcagcgggtaatatc
atgggagttggtcagtgtctgatccatggcctcactgttgtagtgaagaggaaattctct
gccagccgcttctgggaagactgcattaagtacaactgcactgtggtgcagtatatcggg
gaaatctgccgctacttgctgtctcagccagtgcggccatcagaaaagggccacaaagtt
cggctggcagtaggaaatggcttgcgccccagtgtttgggaggctttcacagaacgcttt
agggtggcgcagattggggagttctacggagcgactgagtgcaattgtagcatcgccaac
atggatggcaaggtgggagcctgtggattcaacagtcgtattctccctaacgtgtacccc
atccgtctggtgagggtggacgaggacagcatggagctggttcgggacagccggggcctc
tgtgtgccttgtcgccctggagagccagggcttctggtgggtcgcatcaaccagcaggac
ccattacggcgctttgatgggtatgcaaatcaggacgctacaaggaagaagatagctcat
aatgtcttcaagaaaaatgattctgcatatttatcaggtgacgtcctcgtgatggatgac
ctgggctacatgtactttcgggatcgcggcggggacacgttccgctggcgaggagaaaat
gtttccactacagaggtagagggcattctaagcagtctcctgggtcagactgatgtggct
gtctacggtgtggcagtgccaggtgtggaggggaaggctggcatggctgccatcgcagac
actgcagggagttttgacagcaatggtttcctgcagatggttcaaggagctcttccttcc
tatgctcgcccagtgttcctgcgaatctccccgcatgtagacaccacaggtacatttaaa
atccagaaaaccaggctgcagagggagggatacgacccacgtctcacaactgaccaaatc
tactttttaaacagtagagctgcaagttatgaggctgtagatgaggagctatacaatgct
atagaggagggaagaatgtctctatga
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