Scomber scombrus (Atlantic mackerel): 134000270
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Entry
134000270 CDS
T10651
Symbol
nr5a5
Name
(RefSeq) nuclear receptor subfamily 5, group A, member 5
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134000270 (nr5a5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssco03310
]
134000270 (nr5a5)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
134000270 (nr5a5)
Nuclear receptors [BR:
ssco03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
134000270 (nr5a5)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
134000270
NCBI-ProteinID:
XP_062295615
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Position
18:11290288..11294344
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AA seq
543 aa
AA seq
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MDQPDYHPQQPQALVHHLGNYPEDLLTLEGSSISQEPKTEPHARPESNESCPVCGDKVSG
YHYGLLTCESCKGFFKRSVQNNKHYTCAERQNCPMNLSQRKRCPSCRFQKCLAVGMKREA
VRADRMRGGRNKFGPLYRRDRQMKQQKVYYQANTAPYRIKMETTQTHRPTALNDIHLKGS
HTSVPSSSDTFHQSHMYSSGMGQSCAPMSLDCTVNTDRVITPPPQPYSGLYHHTVPVYFQ
EKGEMPFSYSPAPANYPFHPTPNNSFGPRSTPASSPCSTPSSTTPLTQALDQTLVTPSPA
TITPYFLSQLLEGEQDESQLCAKVLASLQREQANRGKHDRLNTFSIMCKMADQTLFGLVE
WARNSALFKELKVEDQMVLLQSCWSELLVLDHLCRQVTYGKEGCIYLVTGQQIEVSTVIS
QAGTTLRSLVSRTQDLVSKLKALHFDRHEFVCLKYLVLFNPDVKSVQSRRQVEQTQERVN
RALMEHTQHSHPGHSDKFGQLLLRLPEVRSISLQVEEYLYQRHLLGDLPCNSLLTEMLHT
KHS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacctgattatcacccacagcagccccaggctcttgtccaccatctgggcaac
taccctgaggatctattaactttggaaggatcatcaatatctcaggagccaaagacagag
ccacacgctagaccagagtcaaatgaaagctgccctgtgtgtggagacaaagtgtcagga
taccactacggacttctcacctgtgagagctgcaagggtttctttaaacgctcagtgcag
aataacaagcattacacgtgtgcagaacgacagaactgccccatgaacctttcccagagg
aaacgttgtccttcctgtcgcttccaaaagtgtttggctgtgggcatgaagcgagaagca
gtaagagcagatcgtatgagaggtggcaggaataaatttggccctctgtaccgacgggac
aggcagatgaaacagcaaaaggtgtattaccaggcaaatactgcgccctacaggattaag
atggaaactacacaaacacacaggcccacagctctgaatgacattcaccttaagggcagt
cacacaagtgttccatcgtcctctgatacttttcatcagtcccacatgtattcctctgga
atggggcagtcgtgtgcacccatgtctctggactgcacagtgaacacagacagggtgatc
actcctcctccccaaccctactctggactgtaccatcacactgtccctgtatacttccag
gagaaaggagaaatgccatttagctacagcccggcacctgcaaactatccatttcaccca
acccccaacaattcattcggaccaagaagcacaccagcatcatccccatgctcaacacca
agctcaaccacccctctcacccaggctcttgaccaaacccttgtcactccctcaccagcc
acaataacaccctacttccttagccaactcctggagggggagcaggatgagagtcagtta
tgtgcaaaagtcctggccagcctgcaaagagaacaggccaaccgaggcaaacatgatcgc
ttaaatactttcagtatcatgtgcaaaatggctgaccagactctgtttgggcttgtggag
tgggccaggaacagtgcactcttcaaagagctcaaggtggaggaccagatggtactgcta
cagagctgttggagtgagcttctagttctggaccacctctgcagacaggtgacctatggc
aaagagggttgcatatatctggtcacaggacaacagattgaggtatcgactgtcatctct
caggcaggaacaacattgcgtagcctggtatcacggacccaggacctggtgtccaaacta
aaggcactccactttgacagacatgagtttgtctgtctaaaatacttggtactattcaac
cccgatgtgaagtcagtgcagagtcgcaggcaggtggagcaaactcaagagagagtgaac
agagccctgatggagcacacccagcacagtcatccaggacactctgacaagtttggccag
ctgctgcttcggctgcctgaagtgcgtagcattagcttgcaggttgaggagtatttgtac
cagcgccatcttttgggagatttgccctgcaactctttactcactgagatgctgcacacc
aagcacagctga
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