Scomber scombrus (Atlantic mackerel): 134000350
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Entry
134000350 CDS
T10651
Symbol
lbx1b
Name
(RefSeq) transcription factor LBX1b
KO
K09353
homeobox protein LBX
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134000350 (lbx1b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
134000350 (lbx1b)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
Remorin_C
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
134000350
NCBI-ProteinID:
XP_062295667
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Position
2:9793030..9794391
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AA seq
271 aa
AA seq
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MMTSKEVAKCGAVENRRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVKRSYTICGTAHL
ISSSEKHRPSSIPLSSRALLNQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTLFGQR
STPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAK
LKRDLEEMKADVESAKATGQVPLDKLAKLADLEKCANGTLGHPRGESPTRGGQQEHELAQ
KLRTSPLSPFSDHTTSKECSEDEDVEIDVDD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgatgacatccaaagaagtggccaaatgtggtgcagtggaaaacaggaggcgaagtccg
ctggaccacttgccgcctcctgccaactccaacaagccgctgacccccttcagcatcgag
gacatcctcaacaaaccgtcggtgaaacgaagttacaccatttgtggcacagctcatctc
atttcatcctcagagaagcaccgtccgtccagcatccctctgtccagccgggctctgctc
aaccaaacctccccgctatgcgcgctggaggagctggccagcaagaccttcaaggggctg
gaagtcagcgttttacaagctgcggaaggccgggacgggatgactctgttcggccagaga
agcaccccgaagaagcgtcggaagtcccggacggcgttcacaaaccaccaaatctacgag
ctggagaagcgcttcctgtaccagaagtacctgtcccccgcagaccgggaccagatagct
cagcagctgggcctgacgaacgcgcaagtcatcacgtggtttcagaaccggagggccaag
ctaaaacgggacctggaggagatgaaggccgacgtggagtcggccaaggccaccggccag
gtccccttggataagctcgccaaactggcggacctcgagaaatgcgccaacggcacgctg
ggccaccctcgaggcgagtcccccacgcggggcggccagcaggagcacgagctcgctcaa
aaactgcggacgtcgccgctgtctccgttctcagaccacacaactagtaaagagtgctca
gaggacgaggacgtggagattgatgtggatgactga
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