Scomber scombrus (Atlantic mackerel): 134000492
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Entry
134000492 CDS
T10651
Symbol
ccdc88c
Name
(RefSeq) protein Daple
KO
K25811
protein Daple
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134000492 (ccdc88c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
HOOK
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
134000492
NCBI-ProteinID:
XP_062295813
LinkDB
All DBs
Position
19:24178679..24230375
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AA seq
1955 aa
AA seq
DB search
MDVTVSELLASFMESPLVVWVRTLGPLGPCEDVGSEERVNMFMELADGVFLHKIMTHIDP
SPTNQRLNKNMNNDMAVRLHNLTVLIRHIRMYYQDTLQQLIVMPLPNILCIAKDPISAKS
MEELKRLLLLVLGCAVQCERKEEMIEKIKLLDIETQAAIVSHIQEVTHNQMNVLDLSWLE
EGAELAQDDLEPLSRSMAVSLRQLIDQRDKAGEVIVDLTQERDYLSSQQPQEGCRSLSMS
SPERGQTSGGVALNNGGSTLNVAGLTKEEKQHLSVELADTKAKLRRYRQELEEKTEQLMD
SKHEVERQDQELQRMKQENQSLSCEARSVRAYRDEVDSLRERASRVDRLETELTRCKEKL
NDVHFYKTRVEELREDNLTLVETKVLLEEQLSASRGRCDKLHTLEKDNLLLRAKIQDLEM
ERDNERRRLEELVEENMLLEIGQKQSMNESAHLGWELEQLTKNHDNTNTETRKSIVHELN
ECVSSRVLKLEKENRELQSSIERLKDESHVLQEKQLHTQELDRENQGLGKKLERLQGLLD
QERLTNQDMESLGEEILKEKQSLERDLHTLRAEKDRQISELESEKQHLSDAVESLRERAQ
SNSEARVRETEAENRLMHQNITDTTSRLVSLETQLKQASEEAERLRERAGRCEEAEREAA
RVERSRDALNREVASLRACSERSEALEKQVFSLEQEVHRLKRETEEAQQELQRLGRQEAD
NGLLSKENLDLRCSLENLRSSTARLATLQEEHQEAQSKTQELQRRLEETREEAQGERKRV
ERLEVNAATMNQEKHRLEEEIEKSKEEREELERERHEVQSREEELRREVEELKEERRRRE
DGDEERRKLQLDLEQSEKGRKHLEKETWRIRTLLEGKETELEEKATTLATVEKEGVAVSK
EVDRLKEVAVKAKELERENKELQKQATIDKKTLATLREDLVSEKLSVQQQSVELETLNEE
LEKIGLNREKLLQQEHTLEDSRYRLLESRLEETVQQTMKLKEKKISTLEKKLEESNTQST
MLRVELTNARQTLSALRQQKEEENHSQQQSGGNHGHGSATAELLRIKDHLIDVEKNNSSL
QTESSLIKEQLQKMENQNTSLNNQMVSLQRHTNTLQEQNSSLHTQTAKLQVENSTLSSQS
ASLMAQNAVLQGQVTALETEVESWQRQRDEEWRAREGVLSDHERLLNVHERQAHEYEQLI
SQQTALKGKQRTLESELRTMHSKHCILLQQKEKWEEQEERGQKDKEELNQEVQKNRLLQQ
ENLQLKTDVDRLKENQSQQSEQCDGFQQRLIELKSSLSSSQQEASRWMSRYDALNEQHQG
LDLNMTKLDNHCELLSRLKGNLEEENHHLLSQINLLSQQNHSLLERSMESKELYHQEQKL
YIDKLNALRRQKEKLEEKIMDQYKFYDPTPKKRSQWSGAKALAKLIKPRKESSRERGPDR
DKEGGKEKERAKCAPDIPLPAPPPLLLPETPPPLLQRTGSDSLDSGHAHSNHNNHTSSPS
LGPQSPALTPITRGLPDRGRGAYRSSTPGGSSESVNGEDGHRQGQAHKALSSTPSHHSAN
NSSSRLGQAPSRRPRGLLLDEDSRLNTSDPMFGQHSNVGGRPGSADYSHNTSSSNSPVNC
RDVSDRQVRSASLSSDDVMGQSHQSLSRSSTLPYDHAPQRAQPQHGGGGVRNKTRPGSPG
SEMVTLEEFLHESNKKSPPMVSTESREDLMTDYFRSPAPSASTRDQVTPTSYVTPTVQPS
NQRPGQSVKPSPRQPVGQSPASGQPVAQRNSQSLSRAFSLASVDLLRSNGPDSFRGSEGS
PGQSDVVVRRQGGGANGRERPLSARLVGPTNQHADGSFLNPPIHHSSSLNLQTERHGDRE
RTRTPSRNGPTSSSSFHQRGEVAMVTPVRAVPASRLEDTSEHGEGIRDGRSGDSSHLKKD
GEKERCGSVERPKSTPSSPDPNNDPQTVWYEYGCV
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgactgtgtccgagttactggcttctttcatggagtcacctctcgtggtttgg
gtgaggacgctgggtccgctgggcccgtgcgaggacgtgggctcagaggagcgggtcaac
atgttcatggagctggcggacggcgtcttcctgcacaagatcatgacacacatcgacccc
agcccaaccaatcagaggctgaacaagaatatgaacaatgacatggcggttcgccttcac
aacctgactgtgctcattagacacatcaggatgtactaccaggacacattacagcagtta
atagtcatgccccttccaaacattctctgcatcgccaaggatcccatatcagctaaaagc
atggaggagctgaaaagactattgttgctggtactaggctgtgctgtccagtgtgagcgt
aaggaggagatgatagagaagatcaagctgctggacattgagacacaggcagccattgtc
tctcacatccaggaggtgactcataaccagatgaacgttcttgacctgtcctggttggag
gaaggagccgagctcgcacaggacgacctggaacctttgtcccgcagcatggctgtgtcg
ctacggcaactgattgaccagagagacaaagcaggcgaggtgattgtagatctgacccag
gagagggactacctgtccagtcagcagccccaggaagggtgcaggtccctgagcatgagc
agcccggagcgtgggcagacctctggaggtgtggcgctgaataacggaggatcgactttg
aacgtcgccgggctgaccaaagaggagaagcagcatctgtctgtagagctcgctgatacc
aaagccaagctccgtagatacagacaggaactggaggagaaaacagagcagctgatggat
tcaaaacacgaagtggagcgtcaggatcaggagttacagagaatgaaacaagagaaccag
tcgctgtcctgtgaggctcggtcggtgcgagcgtaccgggacgaggtagactcgctgaga
gagagagcgtcccgggtcgatcgactggagacggaactgacccgatgtaaagagaagctc
aatgacgttcacttctacaagactagagtggaggagctccgcgaggacaacctgactctg
gtggagacaaaggtgctgttggaggagcagctgtcggcctccagagggcgctgtgataaa
ctgcacacgctcgagaaagacaacctgttactacgagctaaaatacaggacctggaaatg
gagcgggacaacgaacgtcggaggctggaagagctggtggaggagaacatgctgctggag
atcggacagaaacagagcatgaacgagtcggctcatctgggctgggaactggaacagctg
accaagaaccatgacaacactaacacagagactcggaagtcgattgtccacgagctgaac
gagtgcgtttccagtcgggtgctgaagctggagaaggagaaccgggagctgcagtcctct
atagagagactgaaagatgagagtcacgtcctgcaggagaagcagctccacacacaggag
ctggacagggagaaccagggtctcggcaagaagttggagcgtctccaaggcttattggac
caggagaggctgaccaatcaggacatggagtctctgggagaggaaatactgaaggaaaaa
cagagtctggagagagatctgcacactctgagggcagagaaagacagacagatctcagag
ctggagagtgagaagcagcacctgtctgacgcggtggagtccctccgtgagcgcgctcag
tccaacagcgaggcgagggtgcgcgagacggaggcagagaaccgcctcatgcaccagaac
atcaccgacaccacctcccgattggtcagcttggagactcaactcaaacaagccagcgag
gaggcggagaggctgagggagagagcgggacggtgcgaggaggcggagagggaggccgcg
agggtggagaggagcagggacgctctgaacagagaggtggcatccctgcgtgcgtgcagc
gagcggtcagaggctctagagaagcaggtgttctcccttgagcaggaggtgcacaggctg
aagagagagacagaggaagcccagcaggagctccagcggctggggaggcaggaagcagat
aacggcctgctgtccaaggagaacctagacctccgctgctccctggaaaacctgcgctcc
tcgaccgcccgcctcgccaccctgcaggaggagcatcaggaagcgcagagcaaaacgcaa
gagctgcagaggaggctggaggagacaagagaagaggcacaaggagagaggaagagggtg
gagaggctggaggtgaacgcagccaccatgaaccaggagaagcatcgtttagaggaggag
atagagaagagcaaagaggagagggaagagttggagagagagaggcatgaggtgcagagc
agagaggaggaactgaggagggaagtagaggaactgaaagaggagaggaggagaagagag
gacggtgacgaggagaggaggaagctccaactggacctggagcagtcggagaagggcagg
aagcacctggagaaggagacctggaggatcagaacgctgctggaggggaaagaaacggaa
ctggaggagaaagcaacgacactagctacggtggagaaggaaggcgtggctgtgagtaag
gaggtggataggctgaaggaggtggcagtcaaagccaaggagctggagagagagaacaag
gagctgcagaaacaggcgaccattgacaagaaaactttggctacactgagagaggatctg
gtgtcagagaagctgagtgttcagcagcagagcgttgagttagagacactcaatgaagaa
ctggagaagatcggactgaacagagaaaaactactgcagcaagagcacacactggaggac
agcaggtacaggctgcttgagtcccggctggaggaaacagtccaacagacaatgaagctt
aaagagaagaaaatctccactctggaaaagaaactggaagagagcaacacacagagcacc
atgctacgtgttgaactgaccaacgctcgtcagacactgtctgccctgcgtcagcaaaag
gaggaagaaaaccactcgcagcagcagtcagggggaaatcatggtcatgggtcagccact
gctgagctgctccgcatcaaagatcatctcattgatgtagagaagaataactcctcctta
cagacagagagcagtttaataaaagagcagctccaaaagatggaaaaccagaacacttct
ctcaacaaccagatggtgtcactgcagcggcacaccaacaccctgcaggagcagaattcc
tccttacacacacagactgctaaattacaggtggagaactctactctctcgtctcagagc
gcatctctcatggcccagaatgctgtgctgcagggccaagtcaccgccttggaaacggag
gtagagtcgtggcagcggcagcgtgacgaggagtggcgagccagagaaggcgtgctaagc
gaccacgaacgcttgctgaacgttcatgagaggcaagcgcacgaatacgagcagctcatc
agtcagcaaactgcgctgaaaggcaagcagaggacgctagagagcgagctcaggacgatg
cacagcaagcattgcattttgctgcagcagaaggagaaatgggaggagcaggaggagcgt
ggtcagaaggataaagaggagctaaaccaggaggtccagaagaatcgactactgcagcaa
gagaatctgcagctaaaaacagacgtggacaggttgaaggagaaccaatcacagcagtcg
gaacaatgcgacggcttccagcagcgcttgattgaactaaagagctcgttaagctcctcc
cagcaggaggccagtcgatggatgtcacgatacgatgcgctgaatgagcaacaccagggc
ctggatctgaacatgaccaaactggacaaccactgtgagctgttgagtcgactgaagggg
aacctagaagaagaaaaccaccacctgctgagtcagatcaacctgctgagtcagcagaac
cactctctgctggagagaagcatggagagcaaagagctctatcaccaggaacagaaacta
tacattgataagctgaatgctctccgtcgtcagaaagagaaactagaggagaagatcatg
gaccagtacaagttctacgaccccacacctaaaaagaggagtcagtggtccggagccaaa
gctttagccaaactcatcaaaccaagaaaggagagcagcagggagagggggcccgaccga
gacaaggaagggggcaaagagaaagaacgagctaaatgcgccccagacatccccctaccc
gccccgcctcctctcctcctccctgaaaccccgcccccgctgctacagaggacaggaagc
gactccctagacagcggccatgcccacagtaaccataacaaccacaccagcagcccaagc
ctgggaccccagagtcctgcgctgacgcccatcaccagaggtttgcctgacagaggccgg
ggagcttatcgcagcagtactccaggaggcagcagcgagagtgtcaatggagaagatgga
cacagacaaggtcaggcccacaaagctctgagctctactccgagccatcactcagccaac
aattccagctccagactgggacaagctcccagccgcaggcccagaggtctgttactggat
gaagactctcgcctcaacacctccgaccccatgttcggtcagcacagcaacgtgggaggt
cgcccagggtcggccgattatagccacaacacctccagctccaactcacctgtcaactgc
agagacgtttcagatcgccaggttcgctcagccagcctctccagcgacgacgtcatgggc
caatcgcaccagtccctgtcgcgtagttccaccctcccgtacgaccacgcgccccagagg
gcccaaccacagcacgggggaggcggggtcaggaataaaactcgtcctggttctcctggg
agtgagatggtgacgctggaggagtttctacatgagagcaacaaaaagtctcctccaatg
gtgtccacagaaagcagagaggacctgatgactgactatttcagaagtcccgccccctca
gcatccaccagagaccaggtcacgcccaccagctatgtcacgcccaccgtacaaccatcc
aaccagaggccaggtcagagcgtgaagccgtcgccacggcagcctgttggccaatcccca
gcctcaggccaacccgtcgctcagagaaacagccaatcgctgagcagggcgttcagcctg
gcctccgtcgatttgctccgctccaatgggccggacagtttccgcggaagcgaaggttcc
cccggccaatcggacgtggtggttcggcgacaaggaggaggggctaatgggagagaacgg
ccgctctcggctcgtctggttggaccaaccaatcagcacgcagacggcagtttcctgaac
cctccaattcaccactcgtcctctctcaacctgcagacggagagacacggagacagagag
aggacgaggactccctctcgtaatggccccacctcatcctcatccttccatcagcgagga
gaggtcgccatggtaacccctgtcagggctgtgcccgcctcccgcttagaagacacctct
gagcacggggagggtataagagacgggcggtcgggtgactcctcccacttaaagaaagac
ggagaaaaagagaggtgcggctccgtggaacgccctaaaagcacgccgtcgtcccctgac
ccaaacaacgacccccagactgtgtggtatgagtacggctgcgtataa
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