Scomber scombrus (Atlantic mackerel): 134000553
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Entry
134000553 CDS
T10651
Symbol
yy1a
Name
(RefSeq) transcriptional repressor protein YY1a
KO
K09201
transcription factor YY
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
ssco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134000553 (yy1a)
03083 Polycomb repressive complex
134000553 (yy1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134000553 (yy1a)
03036 Chromosome and associated proteins [BR:
ssco03036
]
134000553 (yy1a)
03029 Mitochondrial biogenesis [BR:
ssco03029
]
134000553 (yy1a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
134000553 (yy1a)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
134000553 (yy1a)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
134000553 (yy1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
C2H2_ASCIZ
TFIIIA_zf-C2H2
Raffinose_syn
IBR
MAM
zf-C2H2_ZN142
BCL_N
Motif
Other DBs
NCBI-GeneID:
134000553
NCBI-ProteinID:
XP_062295904
LinkDB
All DBs
Position
19:14583747..14587617
Genome browser
AA seq
350 aa
AA seq
DB search
MASGDTLYIETDGSEMPAEIVELHEIEVETIETTVVGDDGEHQPMIALQPLDADDANSLH
PHQEVILVQTREEVVGEDDSELHADDGFEDQILIPVPAVEEDYIEQTLVTVAGKSSSTGR
MKRAGSGKKAGKKSYMSAGEMGRKWEQKQVQIKTLEGEFSVTMWASDDKKDIDHEEQITG
ENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKVKEDDAPRTIACPHKGCT
KMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRF
SLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggggacaccctgtacatagagacggacgggtctgaaatgccagccgaaata
gtggagctgcacgaaatcgaagtggagacaatcgagactacagttgttggagacgacggg
gagcaccagccgatgatcgccttacagccgctcgacgcggacgacgcaaactccctccac
ccgcaccaagaggtgattctggtgcagaccagggaggaggttgtgggtgaggatgactcc
gagctgcacgcagacgacggcttcgaggaccagatcctcatcccggtgcccgccgtggag
gaggactacatcgaacagactctggttactgttgcggggaaaagctcgtcgacgggccgg
atgaagagagctggaagcgggaagaaagcgggcaaaaagagctatatgagcgcaggagaa
atgggcagaaaatgggaacagaaacaagtccagataaagacgctggaaggggagttttct
gtcactatgtgggcttcggatgataagaaagacatagaccatgaagagcaaatcacgggt
gaaaactcgcctccggattactcagagtacatgacggggaagaagcttcctccaggaggc
atcccaggaatcgacctgtcagaccccaaacagctggcagagtttgcacgaatgaaacca
aggaaagtaaaagaagacgatgcaccaaggacgatagcctgtccacataaaggatgtacc
aagatgttcagggacaattcggcgatgagaaagcacttgcacacccatgggcctcgcgta
catgtctgcgcagagtgcggaaaagccttcgtagagagttcaaaactgaagaggcatcaa
ctcgtacacacaggagagaaacctttccagtgcacatttgagggctgtggcaagcggttc
tctctggactttaacttgcgcacacatgtgcgtattcacactggagaccgcccctatgtg
tgcccctttgatggctgcaacaagaaattcgctcagtcaaccaacctgaagtctcacatc
ctcacacacgcaaaagctaaaaacaaccagtga
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