Scomber scombrus (Atlantic mackerel): 134000632
Help
Entry
134000632 CDS
T10651
Symbol
pld1a
Name
(RefSeq) phospholipase D1a
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00564
Glycerophospholipid metabolism
ssco00565
Ether lipid metabolism
ssco01100
Metabolic pathways
ssco04144
Endocytosis
ssco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
134000632 (pld1a)
00565 Ether lipid metabolism
134000632 (pld1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134000632 (pld1a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
134000632 (pld1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000632 (pld1a)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
134000632 (pld1a)
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
134000632 (pld1a)
Endosome - Golgi transport
Others
Others
134000632 (pld1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
DUF3785
DBD_HTH
Motif
Other DBs
NCBI-GeneID:
134000632
NCBI-ProteinID:
XP_062296024
LinkDB
All DBs
Position
19:complement(8729852..8758999)
Genome browser
AA seq
1047 aa
AA seq
DB search
MLGTSNLNLVKSEVSDPSVVSDVHDGINMADLVESLDTRELDMGEGEEVDDGSCLGDSRI
PFSAIYATVGFKEATAKVYLATVPITARILEVERFTTAQDRFNLSHHRSVNKSLPAVFKI
ELKHGEFTWMVKRKEKHFMELHRELRTYKTFMRIPLPSRSHTVRRKTVRKSEVREMPSLP
RGGGDELARDEQVSSRRRQLEDYLNKLLKMAMYRKYHHTMEFIDVSQLSFIHDLGPKGLE
GMIYKRSGGHRIPGMNCCGHSQACYRWSKRWLVVKDSFLLYMKPDTGAISFVLLVDKEFG
IKMDSKDTETKHGVRIDSLSRALVFKCISYRHARWWGQSIESFVRSHGKAFLRDHRFGSF
AQEEENIPAKWYVNGKTYMEDVANALEEAKEEIFITDWWLSPEIFLKRPVVEGNRWRLDC
ILKRKAQQGVRIFVMLYKEVELALGINSGYSKRTLMHLHPNIKVMRHPDHVSSSVYLWAH
HEKIVVIDQSVAFVGGIDLAYGRWDDREHRLTDVGSVTRSVALEQAGSNTPSSKGVSSVD
GVTHSNGRGTPPSDPVDLPKLKGIGRSRKARFSLYKHLHKHTMQPADSVSSVDSTGSGSV
RSLKTGVGELQGNTRFWHGKDYCNFVYRDWIQLEKPFDDFIDRYTTPRMPWHDIASVVHG
RAARDVARHFIQRWNFTKIMKPKYRSLSYPFLLPKSHSSASELRYQVPESVNAKVQVLRS
AADWSAGIKYHEESIHNAYIQVIAKSKHYIYIENQFFISCADNRTVYNKIGDAIIERIIR
AHKEGKKYRVYVVTPLLPGFEGDITTGGGNAIQAVMHFNYRTMIRGEYSIISQLKREMDD
QWMNYISFAGLRTHCELEGRLVTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEV
AVIVEDSEKVASVMDGQEFEAGPYALQLRLECFRTILGGHTDTSIDLSDPISDRFYKEVW
MTTAGRNATIYEKVFRCLPSSIVRNTSELEEYLSKPGLAQSDSARAQEELRKIRGFLVQF
PLDFLSEHNLMPSVGTKEAMVPTEIWT
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtaccagtaacctcaacctggtgaagtcagaagtttctgacccctcggtggtc
tcggacgtacacgacggcattaacatggccgaccttgtggagagcttggacaccagagag
ctggacatgggggaaggagaggaggtcgatgatggaagctgcttaggggacagtcgtatc
ccattttcagcgatttatgccacagtagggtttaaggaggccactgctaaggtctacctt
gccactgtgcccatcactgcccggatccttgaggtggagagattcaccactgcacaggac
cgcttcaatctgtctcaccacaggagtgtcaacaagtctctgcctgcggtgtttaagatt
gagctgaagcacggtgagtttacctggatggtaaagagaaaggagaaacatttcatggag
ctgcacagagagctgaggacatacaagaccttcatgaggatacccctgccatcacgcagc
cacacagtgaggaggaagacagtgaggaagagtgaagtgagggagatgccctcgctgccc
aggggaggaggagatgaactggcgcgagacgaacaggtttctagcaggaggagacaatta
gaagactatttgaacaagctgctgaagatggccatgtaccgcaaatatcaccatactatg
gaattcattgacgtcagccaactgtctttcattcatgacttggggcccaaaggactggaa
gggatgatttataagcgctcaggggggcatcgtatccctggcatgaattgctgtggtcac
agccaggcctgctaccgctggtccaaacgctggctggtggtgaaggattcattcctgctg
tatatgaagccggacacaggggccatctcctttgtcctgctggtggataaagagttcggc
atcaagatggactccaaagacacagagaccaaacatggagtcaggatcgatagcttatcc
agggctttggtgtttaagtgcatcagctacagacacgcccgctggtggggtcagagcatc
gaaagctttgtaaggagtcatgggaaggctttccttcgagatcaccgctttggatcgttt
gcacaggaagaggaaaacattcctgccaaatggtatgtgaatggaaagacttacatggag
gatgtggctaatgctttggaggaggctaaagaggaaatattcatcactgactggtggtta
agtccagagatcttcctgaagagacctgtggtggagggtaacagatggaggctggactgt
atcctcaaacgcaaagcacaacaaggagtgcggatatttgtgatgttgtataaggaggtg
gagctcgccctgggcattaactcaggttacagtaagaggaccctcatgcacctgcacccc
aacatcaaggtgatgcgtcatccagatcacgtctcctcctccgtctatctgtgggcacat
catgaaaagatcgttgtcattgaccaatcagtggcctttgttggtgggattgacctcgcg
tatggtcgctgggacgacagagagcatcggctgacggatgttggcagtgtgacacgttct
gtggccctggagcaggccggctccaacactccatccagcaagggcgtgtcttctgttgat
ggcgtcacccacagcaacggacgaggcaccccgcccagtgatccagtggacttgccaaaa
ctgaagggaataggtcgcagtaggaaggctcgcttcagtctctacaaacacctgcacaag
cacaccatgcagccagcagacagtgtcagcagtgtcgacagcacaggcagtggttcagtg
cgaagcctaaagaccggtgttggagagttacagggcaacactcgcttttggcatggaaag
gactactgcaactttgtctacagggactggattcagctcgaaaaaccttttgatgacttt
atcgacaggtacaccactcccagaatgccttggcacgacatcgcctcagtggttcatggc
agagctgcccgggatgtggcaagacacttcattcagcgctggaacttcactaagatcatg
aagccaaagtatcgctctctgtcgtatccattcctgctgcccaagtctcactccagtgcc
agtgagctcagataccaagtccctgagagtgttaatgccaaagtgcaggtgttacggtca
gcagctgactggtcggcaggcataaagtaccatgaggagtccatccataatgcctacatc
caagtcatcgccaagagcaaacactacatctacatagagaaccagttcttcatcagctgt
gccgacaacaggacagtgtacaacaagattggagatgctatcatcgaaaggatcatcaga
gcacacaaggagggtaaaaagtaccgtgtgtatgtggtcacccctctgcttcctggtttt
gagggggacatcaccacaggaggagggaatgccatccaggctgtcatgcacttcaactac
agaaccatgatcagaggagaatactccatcatctcccagctgaaaagggagatggatgat
cagtggatgaactatatctccttcgctggtctgcgaactcactgtgagctggagggacgc
ctggtaacagagctcatctacgtccacagcaagatgctcatcgctgacgacaacacagtc
atcatcggttctgctaacatcaacgacagaagcatgctgggtaaacgtgacagtgaggtt
gcagtgattgttgaggactctgagaaggttgcctctgtgatggatggacaggaatttgaa
gctggaccctacgcgcttcagctgcgcctggaatgctttaggactattcttggaggtcac
actgacaccagcattgacctgtctgaccccatcagtgatcgcttctacaaggaggtgtgg
atgaccacggctggccgcaatgccaccatttatgagaaggtctttcgctgccttccttca
tccatcgtgaggaacacatctgagcttgaagagtacctatccaaaccgggtttggcccaa
agtgattcggcccgtgctcaagaggagctgcgcaaaatcagaggcttcctggtccaattt
cctctggatttcctgtctgagcataacctcatgccctctgttggaacaaaggaggccatg
gtcccaactgagatctggacataa
DBGET
integrated database retrieval system
