Scomber scombrus (Atlantic mackerel): 134000652
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Entry
134000652 CDS
T10651
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
134000652 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssco03400
]
134000652 (mlh3)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
134000652 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
HATPase_c_3
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
134000652
NCBI-ProteinID:
XP_062296052
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Position
19:15935860..15941871
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AA seq
1206 aa
AA seq
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MNAMIKCLSKEVQGKLRSGVAIPSLQQCVEELTLNSIDAGATCVGVRVDMDAFKLQVIDN
GAGISAEDMECVGNRYHTSKCSSVEDLDNLRFYGFRGEAVASIVSLATLVEISSRTRSSV
KTFSRIFKNGKGLDVFESDTARPSAGTTVVICNFFHNMPVRRKRMDAVLEGERIRHRVEA
ISLMHPSVSFTLKNDCTGAMTVQLPKARNTYHRFVQIHGLGRAQKLGEISYNRGQFEVIG
HIGREGHYNNSLQFLYVNDRLLMKTRIHKLLNLLLRRLSSSNQKNDSPDGQSAIRSPKQK
RSQDLHGVYIINIKCAYSEYDICLEPAKTLIEFKDWDGILLCIEETVKAFLNRENLVTVI
SKEDLDYECPKLFGSESTDQEGNNSDKDVQTTISTSALDCSIGMTLASGSVHRKCKDHIA
SEDSVCVESAQMESKEDDEEQLGQKRISAKEVENLQSEGFTSKESRDEPQRVLAELEPSS
DNNFSVEEPTFSEAEKDTQILCLSSSVIQQEGEQEKLSKGREMKLNYTAIISNVNPPISV
TQETLPDSDSINQIRLDCQSTGRHAQTLISNRKISLSNSYIHESLQTKDLSLINRPSFQQ
QDQAVKCVERSFALKRKISLNTDHHRSFQKVFRDFAPVIPSKIPKIISGEKMSLRKESGS
LDKFRTIYGKCDEPSPETSIQNNASLPETDNFVLNPQNLLVSKKDRQHDVTETQKEALSA
FTRLKQVSGRIGGRKSLAAKLCHLSQHRAKDIKTLPHLSGSTSHASTCLSSNDSVQDSNN
NACDTALNAEPVPDHSTKPQQAESEEATTSGDWVHHYDESVGKMVYVNKVTGLSRYDDPP
TEETQVPCTSDVTNMAISVISEIGMEYRCYPFQVDLVLPFLPKSRAERVISSGPGDRGEG
DENSLSSLYSKWNNPVFVRPPMVGVDISTAQADGLAVKIHNILFPYRFSKAMIHSMKVIH
QVDKKFLACLINTRDEESAANAETEGNLLVLLDQHAAHERVRLENLVADSYEDDPDASGQ
RRLCSSTISPPLEISVTEEELRLLRSCQAHLQSLGLEVKFSEAADPQVLVGKVPLCFMEK
ESNEFRRGRLSVIKPIVEEYLQEQIELLRSAGRVKGTLPLTVLKVLASLACHGAIKFNDS
LNRDECCSLVASLSSCQLPFQCAHGRPSIAPLVDILRLDTNQKEIQKPNLRKLRRMYKAW
ELYGNR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctatgattaagtgtttatctaaagaagttcaggggaaacttcgctcgggtgtt
gccattccttcacttcaacagtgcgtagaggagctcaccctaaacagcatcgatgccggg
gcgacgtgtgtgggagtccgggtggacatggatgcgttcaaacttcaggtaatcgacaac
ggtgctgggataagcgctgaagatatggagtgtgtgggaaacagataccataccagcaaa
tgcagctcagttgaagacctggataacctcaggttctacggattcagaggagaagccgtg
gcaagtatagtgtctcttgccacacttgttgaaatctcatcccggactagatcatcagtg
aaaacgttcagcaggatcttcaaaaatggcaagggcttggatgtctttgaatcagacact
gctcggccctctgcagggacaactgtagttatttgtaacttcttccacaacatgccagtc
cgcaggaagaggatggatgctgtcctggagggtgagaggatcagacacagggtggaggcc
atatctctgatgcatccctctgtgtcctttaccctgaagaatgactgcactggagccatg
actgtgcagcttcctaaagccagaaacacttaccacaggtttgtacagatacatggcctt
gggcgagcacagaaactgggagaaatcagttataaccgtggacagtttgaagtgattggc
cacattggcagagagggccactacaacaacagcttacagttcctgtatgtgaatgacaga
ctgcttatgaagacacgaatacacaagcttctgaacctccttttacgccggctgagcagt
tcaaatcagaaaaatgacagtccagatggccagtctgccatcagaagtcctaaacagaaa
cgcagccaagatctgcatggagtatacatcattaatattaaatgtgcttactcagaatat
gatatttgtcttgagcctgccaaaactctaatagagttcaaagattgggatgggattttg
ctttgtattgaggaaacagtgaaagccttcctaaacagggagaacttggtgactgtgatc
tctaaagaggacttggactatgaatgcccaaaattatttggcagtgagagtacagaccaa
gaagggaacaatagtgacaaagacgtccaaacaactatcagtacatccgctttggattgc
agtattggaatgacactggcatctggatccgttcatcgtaaatgcaaggatcacattgct
tctgaggacagtgtttgtgtggagtctgcgcagatggagtccaaagaagacgacgaggaa
caactggggcagaaaaggataagtgcaaaggaggtagaaaaccttcagagtgaaggattc
acaagcaaagaaagtagagatgaaccacagcgtgttctggctgaactggaaccatcatct
gataataatttttctgtcgaggagccaacattcagtgaagctgagaaagatactcaaatt
ttatgtttgtcaagttcagtcatacaacaagaaggcgaacaagagaagctttcaaaagga
agagaaatgaaattaaactatactgccataatcagcaatgtaaatcctcccatcagtgtc
actcaggaaactctgccggattcagacagtattaatcaaattcgacttgactgccagagt
acaggacgacatgcacagactctaataagtaacagaaagataagtctgtccaattcatac
atccatgaaagtctgcagaccaaggatctatctctgatcaacaggccatcatttcagcag
caggatcaagcagtgaaatgtgtagaaagatcctttgcattaaaacgcaaaatctcactc
aatacagaccaccacagatcttttcaaaaggtatttagagactttgctcccgtcatcccc
tcaaagattcctaaaataatatctggtgaaaaaatgtctttacgtaaggagtctggatct
cttgataagtttcggacaatatatggaaaatgtgacgaaccttctccagaaacttccata
cagaataacgctagtcttcctgagacagacaactttgttttgaatccccagaatttgttg
gtttcaaagaaagacagacagcatgatgttacagagacacaaaaagaggcactgtctgct
ttcacccggctgaaacaagtctcaggtcggatcggaggcagaaaatcgctggcagctaaa
ctctgccatttgagtcaacatagggcaaaagatataaaaacactaccacacctgtccggg
tctacctcacatgccagtacctgtctcagtagtaatgacagtgttcaagacagcaacaac
aatgcctgtgacactgcactgaatgcggagccggtccctgaccacagtacaaaacctcag
caagctgagagtgaagaggccactacatcgggggactgggttcatcactatgatgaatct
gtgggaaagatggtttacgtcaacaaagtgaccgggctcagcagatacgacgacccacct
acggaagaaacacaagtcccctgtacatccgatgtcaccaatatggcaattagtgtaatt
tcagaaattgggatggagtacaggtgttacccatttcaggtggatctagtgttgcccttc
ctgcctaaatccagagctgagagagtgattagttcaggcccaggtgacagaggtgagggt
gatgagaactcactttcctccttatactccaaatggaataatcctgtgtttgtccgtcct
cctatggttggtgtggacatatcaaccgcgcaagctgacggactggctgtaaagatccac
aacatcctgtttccataccgcttctctaaggccatgattcactccatgaaggttattcat
caagtggataagaagtttcttgcatgtcttatcaatacaagagatgaagagtccgcagca
aacgctgaaactgaagggaatcttctggtgctgttggaccaacacgctgcacatgagaga
gttcggcttgaaaatctagtggcagattcctatgaagatgacccagatgcatcgggccag
agacgtctgtgctcatcaaccatttctccacctcttgagatcagtgtaacagaagaggag
ctaaggctgcttaggtcttgtcaggcacatttgcagagtttgggactggaagtgaagttc
tcagaggcagcagatccacaagtgcttgtagggaaggtcccgctgtgcttcatggaaaaa
gagagtaatgagttcaggcggggaagactatctgttattaagcccattgttgaggagtat
ctccaagagcagattgagttactccgctcagctggtagagttaaaggaactctgcctctc
actgtgctcaaagtgcttgcctctctagcatgtcacggtgcgatcaaattcaatgatagc
ctgaacagagatgagtgctgcagcttggtggcatccttgtcttcctgccagctgcctttc
cagtgtgcccatggccgtccatctatcgctcccctcgtagacatcctccgtttggacaca
aaccagaaggaaatacagaaacccaacctccgaaaactgagaagaatgtataaagcgtgg
gaactatatggaaatagataa
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