Scomber scombrus (Atlantic mackerel): 134000660
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Entry
134000660 CDS
T10651
Name
(RefSeq) excitatory amino acid transporter 3-like
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134000660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
134000660
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
134000660
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Gene cluster
GFIT
Motif
Pfam:
SDF
DR2241
DUF4434
Motif
Other DBs
NCBI-GeneID:
134000660
NCBI-ProteinID:
XP_062296070
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Position
2:5370571..5380079
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AA seq
628 aa
AA seq
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MQSSESNSGSDSTGCLKTVWNYIIHHKFIVSSLGAVALGIILGFILKIFLNLSELDQQYL
SFPGEMLMRMLQAVTVPLIVTSVITGVSGLSVKTSKRIAGRAAAYFVSTTVMSVTIGLVL
VLMIKPGIGYAAEKGETEDEEAFSTVDALLDLVRNMVPQNLIQACFRQYKTERVEFEIDA
DEQNSSLETTIILNDCPALLQNGTELRLVGHYVEGANTLGLIVWSFVFGLILNVMGERGE
VLVEVLTVLNESTKRMVKLILGYLPFGVLFLIASHVVEVHDWETTFKLGKFMVVVFVGLI
IHGVIVLPLVYFVCVRKNPITVVRGVSSALLTALVISSSSATLPITFQCCEEKLIIDKRI
TRFMLPIGTNINMDGTALYEVVAAVFIAQLNNIPLDISQLLTLSVTSAVSSIGAAGIPAT
GAVTTLFVLTSIGLPAKEASILVVVEWLLDRCNTVVNVFGDCVGVALVNEISMKELEEMD
RHRAHGGDQVHMSQDSDGVMYPAVDGEDEYFQASEDSALDFQHTPEYLSVWDSDAEICTP
SKIQALRKLVRTAEATTGVTLPPLEDMAQKRMLTKETSILRDSTQPCHGLFSLLPSGWRY
SSLHSSTARFINSVYPAVIKLLKKITHR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctctgagtcaaatagcggttctgacagtactggctgcctgaagacagtatgg
aattacattattcatcataaatttatcgtttcaagcctgggtgctgttgcactgggtatt
attctgggcttcattctcaagatttttctcaacttgtctgaactcgaccagcaatacctc
agctttccaggagaaatgctcatgcggatgcttcaggcggttaccgttcctctcattgtt
acaagtgtgataacaggtgtttctggtctaagtgttaaaacctccaagaggatcgctgga
cgtgcagcagcatactttgtttcaaccactgtaatgtctgtgactatagggttagtcttg
gtgctgatgatcaagcctgggattggctatgctgctgaaaaaggtgaaacggaggatgag
gaggccttttccactgtcgatgccttgttggatctagtgaggaacatggtgccacaaaat
ctgattcaggcttgcttccgacagtacaagacggagagggtggagtttgaaattgatgcg
gatgagcaaaattcaagcctggaaacgaccattattcttaatgattgtccggccttatta
cagaatggaacagaattgcgactggtgggccactatgtggaaggagccaatacattgggc
ctgattgtctggtcttttgtttttggcctgatcctcaacgtcatgggagaaagaggggaa
gtacttgtggaggtccttactgtcctcaacgagtccacgaaacgtatggtcaagttgata
ctgggctacttgccatttggagtgctgttcctgattgcaagccatgttgttgaggttcac
gactgggaaactacctttaaacttggaaagttcatggtcgtagtttttgtagggcttata
attcacggagtgatagttttacctctggtctatttcgtgtgtgtgagaaagaaccctatt
accgtcgtcaggggggtttcttctgccttactgactgcactggtcatctcatccagctcc
gccacactgccgatcactttccaatgctgtgaggaaaaactcattatcgacaaaaggatc
actcgcttcatgctgcccattggaaccaacatcaacatggacggaactgccctttatgaa
gtggtggcggcggtttttatcgcccaactcaacaacatccctctggatatcagccagttg
ttaaccctttctgtgacatcagcggtgtccagcataggagcggcagggatcccagctaca
ggagcagtgaccactctctttgttttgacatccattggtttacctgcgaaggaagcgtcc
attctggtggttgtagaatggctcctagaccgctgcaacacagttgttaatgtatttgga
gactgcgttggtgtggcactggttaacgaaatatccatgaaagaactggaagaaatggac
agacacagggcccatggtggagaccaggttcacatgagccaggactctgatggtgtcatg
tacccagccgtggatggggaagatgagtactttcaggccagtgaggattctgctcttgat
tttcaacacactccagaatacttgtcagtctgggacagtgatgctgaaatctgcactcca
agcaagatccaggccctgaggaaactggtgaggacagcagaggcgactactggggtcaca
ctgccacctttagaagacatggcccaaaagcgcatgctgaccaaagaaaccagcatcctg
agagactccactcagccctgtcatggactgttctccctcttgccttcaggctggaggtac
agcagcctgcatagcagcactgctaggttcattaacagcgtctaccctgctgttatcaaa
ctgctaaaaaaaattacacaccgctga
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