Scomber scombrus (Atlantic mackerel): 134000712
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Entry
134000712 CDS
T10651
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134000712 (sox11a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134000712 (sox11a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134000712
NCBI-ProteinID:
XP_062296147
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Position
19:13499599..13500739
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AA seq
363 aa
AA seq
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MVQHTDNSETDGSMSREATDSEESEFMACSPVAINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDSSKSSAPSPEKCGKIAKTPSKKCSKIKTKSGSKSSHGYSDDCVFPSLKVTKTVKSE
LTDEDDDDEYEEDYRMRIKTEDEERLRPYNVAKVPASPTLSSSAESEGTSMYEEVRNNNR
LFYNIKNITKQSTLHAASVSPASSRSVSTSSSSSSSSSSSGEDADDLLFDFSLNFAPSAQ
GSELGNPNSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAGDWLEANFSDLV
FTY
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacacggacaacagcgaaacggacgggagcatgtccagggaggctactgat
tcggaggagagtgaatttatggcatgcagccccgttgcgataaacccggactggtgcaag
acagccaccggtcacatcaagagacctatgaatgcatttatggtctggtcaaaaatcgag
aggagaaagatcatggagcagtcaccggacatgcacaacgcagagatttccaagcgcctg
gggaagaggtggaagatgctcaaggacagcgaaaagatcccgtttatcagagaagccgag
aggctgcggctaaaacacatggctgactaccccgactacaagtacagacccaagaaaaaa
ccaaagctcgacagttcaaaatcatcagcaccgtctccggagaagtgcggtaaaattgca
aagactcccagcaagaagtgctcaaagataaagactaagagcggctccaaatcctctcac
ggctacagtgacgactgtgtttttcccagtttaaaagttacaaagacagtgaaaagtgag
ctcaccgatgaggacgatgacgatgagtacgaagaggactaccggatgaggattaagacg
gaggacgaggagcgcctgaggccgtacaatgtagccaaagttcccgcgagtccaactttg
agctcctcggccgagtccgaggggacgagcatgtacgaagaagtgcggaacaacaacaga
ctgttttacaatatcaaaaacattaccaagcagagcacattacacgctgcttccgtctca
ccagcatcctccaggtcggtctccacatcctcctcctcctccagcagcagctcctcttcc
ggcgaggacgcggacgatttgctgtttgactttagtttaaatttcgcccccagcgcccaa
ggctcggaactgggcaaccccaattcaggaaacctctccctgtctcttgtggataaggac
ctggactctttcagtgagggcagcctgggttctcactttgaattcccagactattgcacg
ccagaactcagtgagatgattgccggggactggctggaggcgaacttttccgacctggtc
ttcacatactga
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