Scomber scombrus (Atlantic mackerel): 134000717
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Entry
134000717 CDS
T10651
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00280
Valine, leucine and isoleucine degradation
ssco00650
Butanoate metabolism
ssco01100
Metabolic pathways
ssco04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
134000717 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
134000717 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
134000717 (hmgcl)
Enzymes [BR:
ssco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
134000717 (hmgcl)
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
134000717
NCBI-ProteinID:
XP_062296153
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Position
19:19116305..19118615
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AA seq
334 aa
AA seq
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MAAVIRLVNRSTLGSVMGPQYLAFSSATKTSVKASRALPETVKIVEVGPRDGLQNEKTIV
PTETKIHLIDLLSESGLRVIEATSFVSPKWVPQMADQKEVMKGICKKPGVSYPVLTPNLK
GFQAAVKAGASEVAIFGAASELFSKKNINCSVDESLQRFDEVVKAAKEAGVPVRGYVSCV
LGCPYEGKVAPEKVAHVAKRLYSMGCYEISLGDTIGVGTPGSMSEMLEAVSREVPVDALA
VHCHDTYGQALANILVALQMGISVVDSSIAGLGGCPYAQGASGNVATEDVVYMLHGLGIQ
TGVDLSKLMDAGAFICRTLNRKSSSKVAQATCKL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcattagacttgtcaacagaagcactttaggctcagttatgggtccgcag
tacctggcgtttagctccgcaacaaagactagcgtaaaagcaagtcgagctcttccggaa
acggtgaaaatagtggaggtgggacccagagatggtcttcagaatgagaagactatcgtc
ccaacagagaccaaaattcatttgattgacttgctgtcagagtcagggctgcgagtcatt
gaggccaccagctttgtgtcaccaaaatgggttccacagatggcagaccagaaagaggtg
atgaaggggatttgtaagaaacctggagtgtcttacccggtcctcacccccaacctcaag
ggcttccaggctgctgtgaaagcaggagcttcagaggtggccatatttggcgccgcgtcc
gagctgttcagtaagaagaatataaactgctcagtggacgagagcttacagcgctttgat
gaggttgtgaaagcagctaaagaggccggtgtgccagttagaggttatgtgtcatgtgtt
cttggatgtccgtatgaagggaaagtggcacctgaaaaagttgcacatgtagctaagcgt
ttatactccatgggctgctatgagatttccctaggtgacaccattggagtggggactcca
ggtagcatgagtgaaatgctggaggctgtgagcagagaggtgccagtcgatgccctggca
gtgcactgccatgatacctacggccaggccctcgctaatatccttgtagccttgcagatg
ggtatcagtgtggtagactcatcaattgcaggacttggcggctgtccatatgcccagggg
gcctctgggaatgttgctaccgaagatgtagtctatatgcttcatggacttgggattcaa
acaggagtggacctctccaaactgatggatgctggagctttcatctgtcggaccctcaac
aggaaatcaagctccaaggtggcacaggccacctgcaaactgtag
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