Scomber scombrus (Atlantic mackerel): 134000744
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Entry
134000744 CDS
T10651
Name
(RefSeq) tumor necrosis factor alpha-induced protein 2-like isoform X1
KO
K19989
tumor necrosis factor alpha-induced protein 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134000744
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
134000744
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GFIT
Motif
Pfam:
Sec6
Med4
DUF3848
MC3
SLATT_4
Motif
Other DBs
NCBI-GeneID:
134000744
NCBI-ProteinID:
XP_062296200
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Position
19:complement(3173883..3185079)
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AA seq
645 aa
AA seq
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MRTRSDSTDSGGFTLSPPLDPNGRPGPGKGLKKKFQKLFGGSKTQANSPAISPTDGHRSP
VEEEPHNVIATFEQCLEDRRLCEASQLLIEREERLFEEIREAEELKHKEEEIDRLAADRR
ALEDLIKQILKQSLKTEVNIEALTSAVKAIRQEEEQDQLWKQRGGTPPAWRPSEWEELHD
STLCSLMTERMENPSPPADSVVDRSSLQVDVCGMGKQLKQDLQWVVDVVKTCYPPEMHIC
NSYARWYHQFFSARLRKIAEFGLGDKDCTFLLRWVNEFYPEILQKLADEIDHEALGWLLP
EDLLEPLEEQYLNKKQSDLTTYIGRVLEEAREKWDKGENPEREDGCFVSTVSYDIIQLIN
GIVTAAIKIVGDQRKAQNLTRPLKNLLERFKTFQDDIMKRSKPNSKPFIKANLGCVKQFR
DVLVTRSQLFPQDVRESCLSILNDMKLSAHTYLLSSVHEVLKPHYRKLGISDWLNKPRPF
DNLLHSIEQEIGELQGSTEACHQELIGQLHQEVTIEYVRRLLKGEVKLKNKEQEKKAYKT
VKDNAESLHSLFIRQGSKEDWLKEILNKIAEVLKLQDLPAIQMEVVSLAADCPDLSGKHV
SALLKLKTNLTKAHRKTVKDTLSDTLRETNTLNAQRPFFSRVHVK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagaacacgctcagactcaacggattcggggggcttcaccctcagccctcccttggac
ccaaatgggagacctgggccaggaaaggggttgaagaaaaagttccaaaagttatttgga
ggcagcaaaactcaagccaattctcccgccatctccccgactgatggacaccgttcacct
gttgaagaggagccgcataacgtgatcgccacatttgagcaatgcctcgaggaccgtcgc
ttatgtgaggccagccaactactgatcgagagagaggagcgtctgtttgaggagataagg
gaagcagaggaactcaaacataaggaggaagaaatagacaggcttgctgcagaccgcaga
gccctggaggacctcataaagcagattctgaaacagtccctcaaaacagaagtcaacatt
gaggctctaacatctgctgtgaaggctatccgccaggaggaggagcaggaccagctgtgg
aagcagaggggtgggacaccgccggcctggaggcccagcgaatgggaggagctccacgat
tcgaccctttgcagcttgatgacagagcgaatggaaaaccccagcccccctgcagacagt
gtggtggataggtcatctctccaggtggacgtctgtggaatgggcaagcagctgaaacag
gacctgcagtgggtggtggatgtggtaaagacctgctacccgccggagatgcacatctgt
aattcctacgccaggtggtaccaccagttcttcagcgccagactcagaaagattgcagag
tttggtctaggagacaaggactgcactttcctcctgcgctgggtgaacgagttttatcca
gaaatccttcagaagctggccgatgagatcgatcatgaagctctggggtggctgctgccc
gaagatttactggaacctctagaggagcaatacctgaacaaaaaacagagtgatctgaca
acttacatcggccgcgtcctggaggaagcacgggaaaaatgggataaaggagagaatccc
gaaagagaggacggctgcttcgtcagtacagtgtcctacgacatcattcagcttatcaat
ggtatcgtgactgcagctataaaaattgtgggagatcaacgaaaggcccagaatctaaca
cggccactgaaaaacttactagaaaggttcaagacctttcaagacgacatcatgaagcga
agcaaaccgaacagcaagccgttcatcaaggcgaacctcggctgtgtcaaacagttcagg
gacgtccttgttacgaggagccaactgttcccgcaggatgttcgggaaagctgtttgtct
atcctgaatgacatgaaactgtctgctcacacgtatttactaagctctgtgcacgaagtc
ctcaagccacattaccgcaaactgggaatcagcgactggctgaataagccaaggccgttt
gataatctgctgcacagcattgaacaagagattggggaacttcaaggttcaactgaagcg
tgtcaccaggagctgattggccagcttcaccaggaagtgacaatagaatatgtgaggagg
ctcctgaaaggtgaagtcaaactgaagaacaaggagcaggaaaagaaggcctacaagacc
gtgaaagacaacgcagagagtttgcacagtttattcataagacagggatcaaaggaggac
tggctgaaggaaatcctgaacaagattgccgaagtgctgaaactccaagacctccccgcc
attcagatggaagtggtatcactggcagctgattgtcctgacctcagtggaaaacacgtt
tcggctctgctgaagctcaagacgaacctcaccaaagcccacaggaagacagtcaaagac
actctgtccgacacgctgagagaaaccaacacgctcaacgctcaacggccttttttctcc
agagttcacgtcaaatga
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