Scomber scombrus (Atlantic mackerel): 134000773
Help
Entry
134000773 CDS
T10651
Symbol
odc1
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00330
Arginine and proline metabolism
ssco00480
Glutathione metabolism
ssco01100
Metabolic pathways
ssco04148
Efferocytosis
Module
ssco_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
134000773 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
134000773 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134000773 (odc1)
Enzymes [BR:
ssco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
134000773 (odc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
134000773
NCBI-ProteinID:
XP_062296231
LinkDB
All DBs
Position
19:complement(23159210..23164547)
Genome browser
AA seq
458 aa
AA seq
DB search
MNTPTEFDFSFLEEGFSARDIVEQTINESSNTDDRDAFYVCDLGDVLKKHLRWVRALPRV
SPFYAVKCNDSRAVVMTLASLGTGFDCASKTEIQLVQSLGVDPSRIIYANPCKQVSQIKY
ASAHGVQMMTFDSEVELMKVARYHDNAKLVLRIATDDSKAVCRLSVKFGAPLKACRGLLE
RAKELGLDVIGVSFHVGSGCTDPETYMQAITDARCVFDMGDELGFNMNLLDIGGGFPGSD
DAELKFEEITAVINPALDKYFPTDCGVRIIAEPGRFYVASAYTLVVNIIAKKVIIDDESA
SDEEDEGTNDKTLMYYVNDGVYGSFNCILYDHAHCLPVLHKKPKPDEVMYPCSIWGPTCD
GLDRIVEQCSLPDMQVGDWLVFENMGAYTVAASSTFNGFQRPDMHYVMSRPAWQQVQQIC
SQGLPAPAEESCLFEVPACCGRESNLEMPTKPCQAHVV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcccaccgagtttgatttttctttcctggaggagggtttctctgctcgggat
attgtcgagcagacgattaatgagtcatccaacacggatgacagagatgccttctacgtc
tgcgacttgggtgacgtgttaaagaagcacctgcgctgggtgagggccctgccccgcgtc
tctcctttctacgctgtcaaatgcaacgacagccgggctgtggttatgactctggcatcc
ctggggactggttttgactgtgccagcaagacggagattcagctggttcagtctctgggc
gtggatccaagcagaatcatctatgccaacccttgcaagcaggtttctcagattaagtat
gcgtcggcccacggcgtccagatgatgacttttgatagcgaggtggaactgatgaaagtg
gcccgctatcatgacaacgccaagttggtgctgcgtatcgccacggatgactcaaaggct
gtgtgtcgcctcagcgtgaagtttggggcgccactcaaagcttgtcggggtctcctcgag
cgggccaaggaactggggctggatgtgattggtgtgagcttccatgtcggcagcggctgc
actgacccagagacctacatgcaggctatcactgatgcccgctgtgtcttcgatatgggg
gatgagctgggcttcaacatgaacctgttggacatcggcggtggtttccctggctcagac
gatgctgaactcaaatttgaagagatcacagctgttatcaatccagccctggacaagtat
ttccccactgactgtggtgtgaggatcattgctgagccagggcgcttctatgtggcctct
gcttacactctggtggtcaacatcattgccaagaaggtcatcattgacgatgaatcagcc
tctgatgaggaagatgaagggaccaatgataagaccctgatgtactacgtcaacgatgga
gtgtacggatctttcaactgtatactttatgaccatgctcactgtctgccagtattgcat
aagaagccaaagccagatgaggtcatgtacccctgcagtatctggggcccaacatgcgac
ggccttgatcgtattgtcgagcagtgcagcctgccggacatgcaggtgggtgactggctg
gttttcgaaaacatgggcgcctacaccgtcgccgcctcctccaccttcaacggctttcag
agaccagacatgcattacgtcatgtcccgccccgcctggcaacaagtgcagcagatctgt
tcccagggcctgccagctcctgcggaggagtcctgcctgtttgaagtgccagcctgctgt
ggccgagagagcaacttggagatgcccaccaagccctgccaggcccatgtggtttaa
DBGET
integrated database retrieval system
